Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0248.Seq
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179 32 0.22
07_01_0313 + 2216498-2216953 31 0.39
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535... 31 0.51
02_03_0367 + 18220099-18220905 31 0.51
06_01_0430 - 3058832-3058952,3059590-3059795,3060103-3060294,306... 30 0.90
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 30 0.90
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 30 1.2
06_03_0219 - 18227559-18227858,18227864-18228340 30 1.2
06_01_0099 + 824557-825532,826090-826245,826422-828064 29 1.6
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 29 1.6
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 1.6
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 29 1.6
08_02_1615 + 28257275-28258428,28258523-28259144 29 2.1
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 2.1
01_01_0070 - 542603-542686,542803-543441 29 2.1
12_01_0442 + 3495333-3496484 29 2.7
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 2.7
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 2.7
04_04_0758 - 27826787-27828178 29 2.7
04_04_0757 - 27822139-27823530 29 2.7
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 28 3.6
07_01_0499 - 3738959-3740068 28 3.6
07_01_0312 + 2214050-2214556 28 3.6
07_01_0310 + 2209084-2209554 28 3.6
05_07_0220 + 28482589-28483752 28 3.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 28 3.6
02_03_0246 - 16807619-16808145,16808208-16808868 28 3.6
09_02_0082 - 4060018-4061604 28 4.8
04_04_0176 - 23329589-23331043 28 4.8
03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451 28 4.8
03_05_0576 + 25765137-25766420 28 4.8
03_05_0543 - 25404630-25405408,25405461-25405605 28 4.8
12_02_0058 + 13015401-13016654 27 6.3
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 27 6.3
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 27 6.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 6.3
09_06_0083 + 20753191-20754480 27 6.3
08_02_1470 - 27350173-27350643,27350721-27351167 27 6.3
08_02_1012 + 23550314-23551504 27 6.3
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 27 6.3
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 27 6.3
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 6.3
04_04_0202 - 23573425-23573949,23574285-23574593 27 6.3
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 27 8.4
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 27 8.4
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 27 8.4
07_03_0154 + 14509979-14512033 27 8.4
07_01_0091 - 692416-693906 27 8.4
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 27 8.4
03_05_0953 + 29111030-29111105,29112250-29113520 27 8.4
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 27 8.4
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 27 8.4
02_05_0860 - 32296743-32296769,32297328-32297357,32298432-322985... 27 8.4
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 27 8.4
01_02_0007 + 10132380-10133201 27 8.4
>04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179
Length = 380
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 478 LPYSHPQPIXRAP-TVPAAPIPPQARPGQAQPLQAVLLPRAVQVHR 344
L Y PI +A T+P AP PPQ PG+A P A ++P Q+ R
Sbjct: 137 LAYPPTVPIDKAKATLPPAPFPPQ-HPGRADP--AEMMPPTKQIVR 179
>07_01_0313 + 2216498-2216953
Length = 151
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 481 ALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGVII 302
A+P P+ PTVPA +PP + AV LP V T+PP +V P ++
Sbjct: 68 AVPKVTLPPMPAIPTVPAVTMPPMP---AVPAVPAVTLPPMPAV-PTVPPNTVVVPAAVV 123
Query: 301 QA 296
A
Sbjct: 124 PA 125
>06_01_0728 -
5356400-5356676,5356888-5357090,5357181-5357474,
5357940-5358063,5358157-5359496
Length = 745
Score = 31.1 bits (67), Expect = 0.51
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 487 QKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
Q L +H QP + P P P+P A+P Q A P A LPP
Sbjct: 27 QPQLHPNHHQP-QQPPMTPTTPLPEAAKPPQNPEKTAASSPHAPSSRPPLPP 77
>02_03_0367 + 18220099-18220905
Length = 268
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 448 RAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 314
R P P +P+ P+ P Q QP Q A +VH PP +FP
Sbjct: 151 RRPPPPPSPMSPKVTPAQQQPPQP-----AEKVHDASPPPSSLFP 190
>06_01_0430 -
3058832-3058952,3059590-3059795,3060103-3060294,
3061241-3061287,3062233-3062455
Length = 262
Score = 30.3 bits (65), Expect = 0.90
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 484 KALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 323
+A PY H P PTV AAP P A + +Q V+ P +R PP +L
Sbjct: 48 RAAPYHHHGP----PTVSAAPHPVPASSSTSMGIQVVIKP----AYRITPPPQL 93
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 30.3 bits (65), Expect = 0.90
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = -1
Query: 457 PIXRAPTVPA---APIPPQARPGQAQPLQAV---LLPRAVQVHRTLPP 332
P RAP VPA AP PP PG Q Q V L+P + + T PP
Sbjct: 162 PASRAPLVPAPPPAPFPPVPTPGMTQAPQMVPGALIPMVLPI--TDPP 207
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
P S P + P PPQ +P Q Q LQ LP+ +Q LPP
Sbjct: 195 PQSQQTPQPQPQVHPQPQQPPQLQP-QPQLLQQPQLPQQLQPQSQLPP 241
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -1
Query: 481 ALPYSHPQPIX-RAPTV--PAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLR 326
+LP P P A TV PAAP PP A P P A+ PR LPP R
Sbjct: 70 SLPRCRPPPAACAASTVRRPAAPSPPPASPPPPPPRLALRFPRRPP---ELPPRR 121
>06_01_0099 + 824557-825532,826090-826245,826422-828064
Length = 924
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 469 SHPQ---PIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRT 341
+HP P RAP + P+PP + P Q P + PR HR+
Sbjct: 402 THPNSFSPHHRAPAMAPYPLPPPSPPQQQLPPASSSKPRRPPPHRS 447
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 475 PYSHP-QPIXRAPTVPAAPIPP-QARPGQAQPLQAVLLPRAVQVHRTLPP 332
P++ P +PI P +P + PG L A L P+ V+R+LPP
Sbjct: 418 PFTGPYEPIPETPKIPIGRAAAVEHNPGGGHWLAAGLSPQVGSVNRSLPP 467
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLP 365
P P AP PAAP ARP QP AV P
Sbjct: 70 PRPPPPSTTTAPPPPAAPAVTPARPPPQQPAVAVAAP 106
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 481 ALPYSHPQPIXRAPTVPAAPIPPQARP 401
ALP + P R P AAP PP++RP
Sbjct: 133 ALPAGNICPSGRVPVAAAAPPPPRSRP 159
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 323
P SHPQP A P P P P ++ P + + + LPP L
Sbjct: 45 PQSHPQPDAPAAAAPPPPAPLTPPPPKSPPPPPHIQTTDLPPPKPLPPAPL 95
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQ 380
P P P + P AP PPQ RP P Q
Sbjct: 56 PPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQ 87
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPL 329
P P+ P P +PP P A P +A P A+ T PP+
Sbjct: 107 PPPVSPPPATPPPALPPSTPPPVAAPAEA---PAALPPATTPPPV 148
>12_01_0442 + 3495333-3496484
Length = 383
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -1
Query: 496 IRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQP 386
+R LP + P +AP AP PP P A P
Sbjct: 195 VRRTPKLPVTRPPRTKQAPPTAPAPAPPPPPPQPASP 231
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -1
Query: 493 RSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRA 359
R + L P P R P PA P+P P P L P A
Sbjct: 344 RMRTTLALCVPAPHPRVPRAPAPPVPAPPAPTPPIPTPPALAPPA 388
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
P P R +PA PIP P P ++ P T+PP
Sbjct: 514 PAPHLRVSRMPAPPIPMPPAPAPPIPTPSMPFPTVPAPPVTVPP 557
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLP 335
P P P PA PIP + P P V +P A P
Sbjct: 524 PAPPIPMPPAPAPPIPTPSMPFPTVPAPPVTVPPATAPSMAAP 566
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 496 IRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQP 386
+R + P P P+ + P+ P+PP RP ++QP
Sbjct: 119 VRQHEKSPDLRPLPLLKQPSPDLRPLPPLKRP-ESQP 154
>04_04_0758 - 27826787-27828178
Length = 463
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 436 VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 323
V A P P Q Q L +L R + VH PP L
Sbjct: 11 VVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>04_04_0757 - 27822139-27823530
Length = 463
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 436 VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 323
V A P P Q Q L +L R + VH PP L
Sbjct: 11 VVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVP----AAPIPPQARPGQAQPLQAVLL 368
P PQP+ +PT P A P PP + P A+L+
Sbjct: 606 PLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALLI 645
>07_01_0499 - 3738959-3740068
Length = 369
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 319 FPGVIIQA*TDFYTSLVKEKYALLRKHI 236
FPG + + YT K+KYALL+K++
Sbjct: 125 FPGTVHRPSAPAYTLTRKQKYALLKKNV 152
>07_01_0312 + 2214050-2214556
Length = 168
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -1
Query: 463 PQP-IXRAPTVPAAPIPPQAR--PGQAQPL--QAVLLPRAVQVHRTLPPL 329
P P + PTVPA P P A P A P AVL P TLPP+
Sbjct: 91 PMPAVPAVPTVPAVPAVPAASLPPMPAVPAVPNAVLPPMPAVPKVTLPPM 140
>07_01_0310 + 2209084-2209554
Length = 156
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 481 ALPYSHPQPIXRAPTVPAAPIPPQ-ARPGQA-QPLQAV-LLPRAVQVHRTLPPLRLV 320
A+P + PI PTVP A +PP A P A P+ AV +P V LPP+ V
Sbjct: 38 AIPAATLPPIPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAV--ALPPMPAV 92
>05_07_0220 + 28482589-28483752
Length = 387
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -1
Query: 454 IXRAPTVPAAPIPPQARPGQ-----AQPLQAVLLPRAVQVHRT 341
+ + TVPA P PPQ+ P A P + +LP+++ + T
Sbjct: 167 LPKEQTVPALPPPPQSPPAALMNPVAVPEKQAVLPKSISIRST 209
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQA 377
P S PQP RAP P PP+ RP +P+ A
Sbjct: 368 PPSIPQPRGRAPN----PSPPKRRPQPPEPMAA 396
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = -1
Query: 499 RIRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVH 347
R S A P + P RAP + P PP A+ + +P +H
Sbjct: 125 RAASPSASPCTTPPATARAPRTSSTPGPPSAQAPPPPVIDRTSIPEREDIH 175
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 499 RIRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLP 365
R+R+ +L P P R P PA P+P P P L P
Sbjct: 234 RVRTT-SLALRAPAPHLRVPRAPAPPVPAPLAPTPPIPTPPALAP 277
>04_04_0176 - 23329589-23331043
Length = 484
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = -1
Query: 481 ALPYSHPQPIXRAP----TVPAAPIPPQARPGQAQPLQAVLLPRAVQV-HRTLPPLRLVF 317
AL S P P R P T A P PP+ P Q QP LLP A R PP VF
Sbjct: 71 ALSPSPPPPPRRGPLPDPTAKAEPEPPKPTP-QQQP--QPLLPAAKPAPPRASPPTTAVF 127
Query: 316 PG 311
G
Sbjct: 128 IG 129
>03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451
Length = 228
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 478 LPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTL 338
LP P P ++ V A PP R G + LQA L V TL
Sbjct: 176 LPRGSPPPYAQSVPVGPAAAPPPPRSGASSSLQAPLAATTTIVAITL 222
>03_05_0576 + 25765137-25766420
Length = 427
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 484 KALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLV 320
+A P P P P P++P PP P A + +V P + LPP+ V
Sbjct: 66 EAPPSPSPSPSPSPPPQPSSPPPPPPSPPPAAAV-SVSPPTQPRPRPELPPVEAV 119
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 478 LPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 314
LP P P+ +PT P+ PP +P Q +P + P PP R P
Sbjct: 109 LPKKTPSPLTPSPT-PSPVTPPPQQPPQPEPRRPPAAPLPGVRTPPSPPRRAPAP 162
>12_02_0058 + 13015401-13016654
Length = 417
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 460 QPIXRAPT-VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 314
QP AP VPAAP PP+ P Q P + + PPL+ P
Sbjct: 171 QPQEPAPLPVPAAPAPPRQVPVVTQQAPPPPPPLVPVITQDAPPLKRPAP 220
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 493 RSQKALPY-SHPQPIXRAPTVPAAPIPPQARPGQAQ 389
R+Q+ P SHP PI A V P PP P Q
Sbjct: 312 RTQQLPPLMSHPPPIRMASPVRIRPAPPLFTPSAVQ 347
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 478 LPYSHPQPIXRAPTVPAAPI---PPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
+P S P APTV A P+ PP A + PL + P A+ V LPP
Sbjct: 31 VPPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAI-VPPALPP 81
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -1
Query: 490 SQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
S A P P P P AP PP G+ P P+A + T+PP
Sbjct: 728 SAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPP 780
>09_06_0083 + 20753191-20754480
Length = 429
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -1
Query: 472 YSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
YS P P A VP P+PP P + PL P LPP
Sbjct: 279 YSSPPPAPTA-FVPHTPLPPVDVPALSPPLPHGKTPSGAPGGIALPP 324
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 499 RIRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQP 386
R++ ++ Y RA T AA PP+ARP P
Sbjct: 196 RVQEKRVQKYVEALDAIRAKTKKAAAAPPKARPPHLPP 233
>08_02_1012 + 23550314-23551504
Length = 396
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPGQAQPLQA 377
P P+ AP V +A P ARP + +P +A
Sbjct: 175 PPPVPAAPEVASAVSTPPARPKRGRPPRA 203
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 445 APTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 314
AP +P++ PP A P + PLQ + + PPL + P
Sbjct: 321 APPIPSSEPPPSALPNNSFPLQPPGGSLSTLSYTGPPPLMNIMP 364
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPGQAQPLQAVL-LPRAVQVHRTLPP 332
P P APT P AP P R P QA L P + + PP
Sbjct: 174 PPPQAPAPTPPQAPAPTPPRAPTPTPPQAPLPAPSKSRASQAPPP 218
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 478 LPYSHPQPIXRAPTVPAAP-IPPQARPGQAQPLQA 377
L S P P RAP +P+ P +PP P A P ++
Sbjct: 34 LSASDPSPTTRAPLLPSPPRLPPLLVPFAAVPARS 68
>04_04_0202 - 23573425-23573949,23574285-23574593
Length = 277
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 481 ALPYSHPQPIXRAPTVPAAPIPP 413
AL ++HP P+ P VPA P PP
Sbjct: 193 ALFHAHP-PVAATPPVPALPSPP 214
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 460 QPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
Q RAP+ PA P PPQ P + P L P Q PP
Sbjct: 533 QAASRAPSPPAPPSPPQ-DPAPSPP-HDPLAPSLPQAPAATPP 573
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQP 386
P SHP PI P P P A +QP
Sbjct: 434 PPSHPTPITSVAPAPPPPPPAAAAAAASQP 463
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 442 PTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGV 308
P P P+P A P A PL + LP + L PG+
Sbjct: 222 PPTPPRPLPDMAGPSSATPLLPLQLPGLAGSSSAMSLPALQLPGM 266
>07_03_0154 + 14509979-14512033
Length = 684
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 493 RSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQ 389
+S+ A P P P+ A P P PP P Q Q
Sbjct: 35 KSEPASPERGPLPLPAAAPPPPPPPPPPPPPPQVQ 69
>07_01_0091 - 692416-693906
Length = 496
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 484 KALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLP 365
+A Y HP P+ V AAP P RP + P++A + P
Sbjct: 232 RAPVYHHPLPLGPRVAVLAAPAP---RPARHAPVRARVAP 268
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 463 PQPIXRAPTVPAAPIPPQARPG 398
P P PT PA P PP AR G
Sbjct: 52 PPPPPPPPTQPAPPPPPPARSG 73
>03_05_0953 + 29111030-29111105,29112250-29113520
Length = 448
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 457 PIXRAPTVPAAPIPPQAR-PGQAQPLQAVLLP 365
P APT+P P P AR PGQ QP L P
Sbjct: 361 PAAAAPTLPVKPSPAPARLPGQ-QPQVTPLQP 391
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 496 IRSQKALPYSHPQPIX--RA--PTVPAAPIPPQARPGQAQP 386
+++ A + HP+P RA P +P+AP PP A + +P
Sbjct: 13 LKAAAAAAHLHPKPFFSPRAAPPRIPSAPAPPAAGGSRYRP 53
>03_01_0522 -
3919120-3919696,3919835-3919919,3919955-3919985,
3920078-3920158,3920271-3920338,3920645-3920698,
3921023-3922379
Length = 750
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 496 IRSQKALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 332
+RS ++ P PI P V P P Q Q + P+A + + LPP
Sbjct: 641 VRSLAMQTFATPGPILPGPPVTPMQWPVFISPPQQQLSACAVWPQAGTLQQELPP 695
>02_05_0860 -
32296743-32296769,32297328-32297357,32298432-32298503,
32298967-32299812
Length = 324
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 457 PIXRAPTVPAAPIPPQARPGQAQPL 383
P+ APT AA +PP P Q P+
Sbjct: 152 PVPPAPTPTAAAVPPPPPPQQQTPM 176
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 475 PYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRT 341
P + P P APT+P P PP+ +P P + L+ + T
Sbjct: 354 PPAPPPPPPFAPTLPPPP-PPRRKPPSPSPPSSPLIENTSALRST 397
>01_02_0007 + 10132380-10133201
Length = 273
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 481 ALPYSHPQPIXRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVF 317
A P PQP +P P P PGQ + P ++ RTL P +++
Sbjct: 206 APPQPLPQPDPNSPPQPLPQPDPNTPPGQQINAKISSQPDSIGGARTLYPYGVIY 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,664,781
Number of Sequences: 37544
Number of extensions: 229511
Number of successful extensions: 1135
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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