Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0246.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.44 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 380 ISHQEISM*REVCYHFFAHILEILIEK 300
           I HQE+    + C  F  H++ +L E+
Sbjct: 157 IYHQELEKYEQACNEFTTHVMNLLREQ 183


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 26   LCSLHHH 6
            LCSLHHH
Sbjct: 1304 LCSLHHH 1310


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 226 THHKGLCVQIQSESAHFSNRILHRIE 149
           +HH G   +  SES+  S R   R+E
Sbjct: 797 SHHYGRRERSGSESSSISERCSSRVE 822


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +1

Query: 73  ETLFQTARDINIAITNQFVYYELLPTLFGEEFCLKNELIHSESGHRDLYDESIPATYL 246
           +T  Q A  + +  TN+   +E L  L  +EF   +E + +  G + +Y   +   +L
Sbjct: 228 DTSKQLAAALGMQTTNEKEIFERLSILPVDEFLQISEEVANIWGLKKVYAPVVDGEFL 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,979
Number of Sequences: 336
Number of extensions: 2518
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)