Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0245.Seq
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 123 9e-29
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 123 9e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 107 5e-24
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 107 5e-24
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 107 6e-24
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 101 3e-22
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 101 3e-22
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 96 1e-20
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 63 1e-10
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 62 2e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 61 6e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 53 1e-07
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.010
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 2.1
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 3.6
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 28 3.6
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.3
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 123 bits (296), Expect = 9e-29
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MXP 253
M P
Sbjct: 61 MNP 63
Score = 119 bits (287), Expect = 1e-27
Identities = 55/90 (61%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAXKGEDITFFPEEVXS 426
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V KGE+ F PEE+ S
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 427 MVLTKMKETXEAYLGKTXAECSYHXSRXFN 516
MVL KMKET EA+LG T + FN
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAYFN 152
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 123 bits (296), Expect = 9e-29
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MXP 253
M P
Sbjct: 61 MNP 63
Score = 114 bits (275), Expect = 3e-26
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAXKGEDITFFPEEVXS 426
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V KGE+ F PEE+ S
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 427 MVLTKMKETXEAYLGKTXAECSYHXSRXFN 516
MVL KMK+T EA+L T + FN
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTYFN 152
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 107 bits (257), Expect = 5e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MXP 253
P
Sbjct: 61 RNP 63
Score = 106 bits (255), Expect = 8e-24
Identities = 50/89 (56%), Positives = 60/89 (67%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE F PEE+ +M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 430 VLTKMKETXEAYLGKTXAECSYHXSRXFN 516
VL KMKET E YLG T + FN
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFN 151
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 107 bits (257), Expect = 5e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MXP 253
P
Sbjct: 61 RNP 63
Score = 106 bits (255), Expect = 8e-24
Identities = 50/89 (56%), Positives = 60/89 (67%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE F PEE+ +M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 430 VLTKMKETXEAYLGKTXAECSYHXSRXFN 516
VL KMKET E YLG T + FN
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFN 151
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 107 bits (256), Expect = 6e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MXP 253
P
Sbjct: 61 RNP 63
Score = 100 bits (239), Expect = 7e-22
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE F EE+ +M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 430 VLTKMKETXEAYLGKTXAECSYHXSRXFN 516
VL KMKET EA LG + + FN
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAYFN 151
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 101 bits (242), Expect = 3e-22
Identities = 45/75 (60%), Positives = 55/75 (73%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++ F PEEV +M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 430 VLTKMKETXEAYLGK 474
VL KMKE E+YLGK
Sbjct: 154 VLVKMKEIAESYLGK 168
Score = 93.5 bits (222), Expect = 8e-20
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMXP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 101 bits (242), Expect = 3e-22
Identities = 45/75 (60%), Positives = 55/75 (73%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++ F PEEV +M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 430 VLTKMKETXEAYLGK 474
VL KMKE E+YLGK
Sbjct: 154 VLVKMKEIAESYLGK 168
Score = 93.5 bits (222), Expect = 8e-20
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMXP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSM 429
P NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E F PEEV +M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 430 VLTKMKETXEAYLG 471
VLTKMK+ E+YLG
Sbjct: 151 VLTKMKQIAESYLG 164
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMXP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ + P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAXKGEDITFFPEEVXSMV 432
NT+F KRLIGR++ED VQ D+K P+++V + G ++ K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQGK----VYSPSQVGAFV 148
Query: 433 LTKMKETXEAYLGKT 477
L KMKET E+YLG T
Sbjct: 149 LMKMKETAESYLGTT 163
Score = 60.9 bits (141), Expect = 6e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 238
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAXKGEDITFFPEEVXSMVL 435
NT+F KRLIGR++ED VQ D+K P+++V V +G++ + P +V + VL
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK-ASNGDAWVEAQGKE--YPPSQVGAFVL 149
Query: 436 TKMKETXEAYLGKT 477
KMKET E+YLG T
Sbjct: 150 MKMKETAESYLGTT 163
Score = 60.9 bits (141), Expect = 6e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 238
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMXPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNV 280
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAXKGEDITFFPEEVXSMV 432
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + + F V S++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 433 LTKMKETXEAYLG 471
L +K E LG
Sbjct: 121 LRCLKYNAERKLG 133
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMXPT 256
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 257 TQYSMPNV 280
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAXKGEDITFFPEEVXSMV 432
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + + F V S++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 433 LTKMKETXEAYLG 471
L +K E LG
Sbjct: 121 LRCLKYNAERKLG 133
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAXKGEDITFFPEEV 420
P TI+DAKR IGR FE + +D K +PF++ D GK ++ +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 421 XSMVLTKMKETXEAYLGKTXAECSYHXSRXFN 516
S+++ +K +LG T + FN
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPAEFN 186
Score = 44.4 bits (100), Expect = 5e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 220
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 221 DAAKNQVAMXP 253
A Q P
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAXKGEDITFFPEEVXSMV 432
NT+ + K LIGRKF D Q + P +VV ++V+ GE TF PE+V + +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAAL 121
Query: 433 LTKMKETXEAYLG--KTXAEC 489
LTK++ E+ L K ++C
Sbjct: 122 LTKLRTIVESQLSDVKKVSDC 142
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 241
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAV 56
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 229
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +2
Query: 158 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMXPTTQYSMPNVSSDVSSKMLLCKP 319
D G+ ++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 135 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 236
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 259 CCGXHRHLVLGGISDETLGVCERNIRRSGPVA 164
CC H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +2
Query: 158 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMXPTTQYSMPNVSSDVSSKMLLCKP 319
D G+ ++V D + +IG+ + + T+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 171 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 67
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 372 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 262
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,547,202
Number of Sequences: 27780
Number of extensions: 249569
Number of successful extensions: 696
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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