Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0244.Seq
         (528 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BTR5 Cluster: Serine protease; n=1; Beggiatoa sp. PS|...    33   4.1  
UniRef50_A2BVD9 Cluster: Dehydrogenases with different specifici...    32   7.1  
UniRef50_A0CS98 Cluster: Chromosome undetermined scaffold_26, wh...    32   9.4  

>UniRef50_A7BTR5 Cluster: Serine protease; n=1; Beggiatoa sp.
           PS|Rep: Serine protease - Beggiatoa sp. PS
          Length = 676

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 214 LKFYIRCVIIHSPLKIYTKI*KMLDPIHLGFGALNTYGVNSFSIGL 351
           LKF +  V+I   LKI   I  +L PI LG   L+  G+N+FS+ +
Sbjct: 31  LKFLLIFVVIILGLKIIFGINLLLVPIILGINLLSVSGLNNFSLSI 76


>UniRef50_A2BVD9 Cluster: Dehydrogenases with different
           specificities; n=2; Prochlorococcus marinus|Rep:
           Dehydrogenases with different specificities -
           Prochlorococcus marinus (strain MIT 9515)
          Length = 238

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 348 PYRKTIDPIRIQSPKAKVNRVKHFLNFCVYF*WTMYNNASYIKF 217
           P++  ++PI I +PK   NR+  F N  ++      N  SYI F
Sbjct: 174 PFKSELNPIGIMNPKFVSNRIYDFANLNIFLIIVSPNPLSYILF 217


>UniRef50_A0CS98 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 626

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 172 LRKTIENLCCI*KRSRFPPIYGNYSFTKQLNSMNYMVRY 56
           ++K  EN C I +R + P +   YSF + LN++ +M+ Y
Sbjct: 58  MKKLCENECQIMQRFQHPNLVKFYSFQRTLNNVYFMMEY 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,999,957
Number of Sequences: 1657284
Number of extensions: 9279732
Number of successful extensions: 13926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13925
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)