Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0244.Seq
         (528 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0488 - 3597652-3598761,3599619-3600860                           27   7.1  
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232...    27   9.3  

>01_01_0488 - 3597652-3598761,3599619-3600860
          Length = 783

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 286 DPIHLGFGALNTYGVNSFSIGLALFSCYVG 375
           DP+H G   L  + VN FS  L  F+C  G
Sbjct: 580 DPLHDGKTMLKIWNVNKFSGVLGAFNCQGG 609


>01_06_1086 -
           34421837-34422311,34422426-34422612,34423162-34423291,
           34423485-34423720,34423804-34423961,34424048-34424128,
           34424216-34424281,34424364-34424432,34424722-34424866,
           34425645-34426138,34426244-34426811,34429529-34429574
          Length = 884

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 58  TLPYNSLNSIVL*SYSYRRLVG 123
           T+PYN +NS+   + SY +L+G
Sbjct: 451 TIPYNQVNSLKSLNLSYNQLIG 472


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,325,488
Number of Sequences: 37544
Number of extensions: 209712
Number of successful extensions: 224
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)