Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0241.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.9  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 434 ICRLFFLNCSSK 469
           +C L+F+NC++K
Sbjct: 221 LCSLWFINCTAK 232


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 185 FVMWGFYY*IYKLFYLTPVYFCNNSLFLYYYY 90
           F++   Y+ ++ LFY   + F  + L   YY+
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYF 103


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 434 ICRLFFLNCSSK 469
           +C L+F+NC++K
Sbjct: 221 LCSLWFINCTAK 232


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 328 NTILPSINSSKWCSNKY 378
           N I PSIN    C N Y
Sbjct: 360 NLISPSINDDGTCGNGY 376


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 328 NTILPSINSSKWCSNKY 378
           N I PSIN    C N Y
Sbjct: 361 NLISPSINDDGTCGNGY 377


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 328 NTILPSINSSKWCSNKY 378
           N I PSIN    C N Y
Sbjct: 361 NLISPSINDDGTCGNGY 377


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 494 KFTGFCVCLNLGAFSYIYNSXIIIRMN 574
           +F G    L    F YIY+  +++  N
Sbjct: 249 QFVGIFCSLYFCIFGYIYDDEMVVPQN 275


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 494 KFTGFCVCLNLGAFSYIYNSXIIIRMN 574
           +F G    L    F YIY+  +++  N
Sbjct: 74  QFVGIFCSLYFCIFGYIYDDEMVVPQN 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,048
Number of Sequences: 336
Number of extensions: 2594
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)