Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0241.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    24   4.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.3  

>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 92  NNSIKITNYYRNRPELNKIIYIF--NNKIPTSQIVVSFRRLNQFT 220
           + S+K+  YY    + ++ +YIF   NKIP  +  ++ R++   T
Sbjct: 2   SRSVKL--YYDLMSQPSRALYIFLSTNKIPFDRCPIALRKMQHKT 44


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 356 ELLIEGNIVLIKRHIQYHGYVI 291
           ++++EG+ +   RH++Y G +I
Sbjct: 700 QIIVEGHTIRSSRHLKYLGIMI 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,030
Number of Sequences: 2352
Number of extensions: 9182
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)