Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0239.Seq
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 96 3e-19
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 92 5e-18
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 88 6e-17
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 86 2e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 80 2e-14
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 80 2e-14
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 79 5e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 71 7e-12
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 70 2e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 64 8e-10
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 63 2e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 62 4e-09
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 61 8e-09
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 56 3e-07
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 52 5e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 52 6e-06
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 50 2e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 48 6e-05
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 48 8e-05
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 48 8e-05
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 47 2e-04
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 46 3e-04
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 45 5e-04
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 45 5e-04
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 44 0.001
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 44 0.001
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 44 0.002
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 43 0.003
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 43 0.003
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 40 0.016
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 39 0.047
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 38 0.063
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.14
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 36 0.25
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 36 0.25
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 36 0.33
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 36 0.33
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 35 0.58
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 35 0.77
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 34 1.0
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 34 1.0
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 33 1.8
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 33 2.4
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 33 3.1
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 3.1
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 33 3.1
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 32 4.1
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 32 4.1
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 32 5.4
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 31 7.2
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 7.2
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 31 7.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 95.9 bits (228), Expect = 3e-19
Identities = 49/68 (72%), Positives = 51/68 (75%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KA VAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 392 XGHIGLGV 415
GH+GLGV
Sbjct: 134 NGHVGLGV 141
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 91.9 bits (218), Expect = 5e-18
Identities = 47/66 (71%), Positives = 49/66 (74%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KA VAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 392 XGHIGL 409
GH+GL
Sbjct: 109 NGHVGL 114
Score = 58.4 bits (135), Expect = 5e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 88.2 bits (209), Expect = 6e-17
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDN 391
K + E L IKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTR KA V IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 392 XGHIGLGV 415
GH+GLG+
Sbjct: 107 DGHVGLGI 114
Score = 58.4 bits (135), Expect = 5e-08
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++++KEWVPVTKLGRLV+ GKI +E IYL+SLP K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 86.2 bits (204), Expect = 2e-16
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TR KA V IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 392 XGHIGLGV 415
GH+GL V
Sbjct: 74 NGHVGLSV 81
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 174 VPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
+PVTKLG L+ + KI LE IYLFSLP K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 80.2 bits (189), Expect = 2e-14
Identities = 42/65 (64%), Positives = 46/65 (70%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTR KA VAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 392 XGHIG 406
G+ G
Sbjct: 62 NGYAG 66
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 79.8 bits (188), Expect = 2e-14
Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 230 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIG 406
EH+ +F IKE +I++ F+G L DEV+KI PVQKQT AGQR R KA V +GD GHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 407 LGV 415
LGV
Sbjct: 129 LGV 131
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 156 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
+D+ WVP TKLGRLV++GKI LE I+LFSLP K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+KEF+IID L P L DEV+ I PVQKQTRAGQRTR KA V +GD+ GH+GLG+
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGI 115
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++K WVPVTKLGRLV+ GKI +E I+L SLP K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 71.3 bits (167), Expect = 7e-12
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXK 367
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR K
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 58.4 bits (135), Expect = 5e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIG 101
Score = 37.5 bits (83), Expect = 0.11
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 248
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 64.5 bits (150), Expect = 8e-10
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
IKE++I+D FL +L +E L I PVQKQT AGQ+TR KA V +GD+ HIGLG
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLG 143
Score = 50.4 bits (115), Expect = 1e-05
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++EWVP+TKLGRLV+ GKI LE+I+ FS+P K
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 63.3 bits (147), Expect = 2e-09
Identities = 31/38 (81%), Positives = 31/38 (81%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
DEVLKIMPVQKQT AGQRTR A VAIGD GH GLGV
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGV 85
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 62.1 bits (144), Expect = 4e-09
Identities = 35/88 (39%), Positives = 46/88 (52%)
Frame = +2
Query: 152 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQ 331
QG + P K + + +L IKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 332 KQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
KQ +AG+R R K V I D ++ LGV
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGV 202
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 61.3 bits (142), Expect = 8e-09
Identities = 33/52 (63%), Positives = 35/52 (67%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXK 367
K + E L IK EIIDFFLG SL +EVLK MPVQKQTRAGQ TR K
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 54.4 bits (125), Expect = 9e-07
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+P TKLG LV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 56.0 bits (129), Expect = 3e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 52.0 bits (119), Expect = 5e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNSRSLISSSARP 296
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 51.6 bits (118), Expect = 6e-06
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGL 409
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+ GH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 35.9 bits (79), Expect = 0.33
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 177 PVTKLGRLVREGKIDKLESIYLFSLPSK 260
PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = -2
Query: 415 DTQTNMTXVVANGNXCLXTCALSGTCLFLXRHDL*NLIIQGRAEEEINDLEFFDGK 248
D QT++ V +G+ L L+GT L L HDL + ++Q A+EEI+DLE F+G+
Sbjct: 61 DAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 50.0 bits (114), Expect = 2e-05
Identities = 30/62 (48%), Positives = 35/62 (56%)
Frame = +2
Query: 230 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGL 409
E L IKE EIID FLG +L DEVLK +P QK TR GQ + GD GH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQYYK------AGDYNGHVIT 121
Query: 410 GV 415
G+
Sbjct: 122 GL 123
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 177 PVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
P +KLG LV++ +I L IYLFSLP K +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 48.4 bits (110), Expect = 6e-05
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
IKEFE+ DF L L D+VLK+M V+KQ AG+ R K V I ++ LGV
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGV 68
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 48.0 bits (109), Expect = 8e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 230 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGL 409
E L I+E EI+D L P L+D+VL + +Q+ T +G+R R +G++ G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 410 GV 415
+
Sbjct: 71 AI 72
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 48.0 bits (109), Expect = 8e-05
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIG 406
+KE EI+D L P L DEVL I VQ+ T +G+R + + VA+G+ G++G
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLG 135
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +2
Query: 245 FFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ +KEFEI DFFL SL D+VLKI+P+ + R Q TR + I + GH G+GV
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGV 71
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 46.0 bits (104), Expect = 3e-04
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
+KE++I+D+ + P L DEV+ I Q+ T +G+R +G+ G++G+G
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVG 84
Score = 31.1 bits (67), Expect = 9.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
+EW P T+LGRLV G+I + LP K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 260 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
E EI+D L P L ++VL + VQ+ ++G+R R +A V +G+ G++G+G+
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGM 96
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIG 406
+KE E++D + P L DEVL I VQ+ T +G+R + + VA+G+ G IG
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
W P T+LG+ V EG+ID ++ LP K S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
I+E II L P L EV+ + +QK T GQ TR KA VA G+ G++G+G
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIG 125
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
I E EI+D L P L EV+ I VQKQT AG+ +R K V +G+ G++ +G
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIG 92
Score = 33.9 bits (74), Expect = 1.3
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLP 254
+EW P T +G LV+EGKI ++ ++ +LP
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLP 40
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
I+E II L P L EV+ + +QK T GQ TR KA VA G+ G++G+G
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIG 106
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 42.7 bits (96), Expect = 0.003
Identities = 17/50 (34%), Positives = 33/50 (66%)
Frame = +2
Query: 266 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
++++ G SL +V++ + V + T++G++ + K V +GD GH+GLGV
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGV 147
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 42.7 bits (96), Expect = 0.003
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +2
Query: 248 FTIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ IKE EIID L P +N EVL I + T +G+R R + A+G+ G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Score = 31.9 bits (69), Expect = 5.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 168 EWVPVTKLGRLVREGKIDKLESIY 239
EW P TKLG +V+EG+I + I+
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIF 38
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 40.3 bits (90), Expect = 0.016
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
W PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 38.7 bits (86), Expect = 0.047
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 287 GPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
GP ++VL++ + K + G+ +A VA+GD G IGLG
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLG 109
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 38.3 bits (85), Expect = 0.063
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 329 QKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
QKQT+ GQ+ R K GD GH+GLG+
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGI 29
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 37.1 bits (82), Expect = 0.14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESI 236
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
Score = 34.7 bits (76), Expect = 0.77
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Frame = +2
Query: 248 FTIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQRTRXKAXVAIGD 388
+ I+E EI+D L P+L E +K + QK+T G +TR + +GD
Sbjct: 33 YVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
Query: 389 NXGHIGLGV 415
GH+G+G+
Sbjct: 92 KDGHVGVGL 100
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 275 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
D L ++ + ++I +K+T AGQ+TR KA V D GH+ L V
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 36.3 bits (80), Expect = 0.25
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
L + V+ + V K + G+R R A V +GD GH+G G
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFG 50
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 35.9 bits (79), Expect = 0.33
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 293 SLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ + V+KI + K T+ G+ R A V IGD G +G G+
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGM 88
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 35.9 bits (79), Expect = 0.33
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ ++KI V K T+ G++ +A V IGD G +G+GV
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGV 65
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 35.1 bits (77), Expect = 0.58
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2
Query: 253 GKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 158
GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 22 GKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 34.7 bits (76), Expect = 0.77
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 281 FLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
F ++V+ I V K T+ G+ R A V +GD G +GLG
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLG 81
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 34.3 bits (75), Expect = 1.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
L ++++ + + K T+ G+ R A IGD G++G G+
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGL 117
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 34.3 bits (75), Expect = 1.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+++LKI V K T+ G+ A+GD G IGLG+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGL 48
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 33.5 bits (73), Expect = 1.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKI 218
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 33.1 bits (72), Expect = 2.4
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = +2
Query: 257 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGL 409
K+ II FFL SL DE IMPVQ QT R K V+I D H+ L
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDL 134
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 32.7 bits (71), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ V+++ V K + G++ +A V +GD G +G+GV
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGV 223
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 3.1
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 180 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 22
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 32.7 bits (71), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLGV 415
+ V++I V K + G++ +A + +GD G +G+GV
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGV 105
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 183 TKLGRLVREGKIDKLESIYLFSLPSKNSRSLISSSA 290
TK+GRL I+ ++ +YLF P N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 32.3 bits (70), Expect = 4.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
+ V+++ V K + G++ + +A V +GD G++G+G
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVG 185
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 31.9 bits (69), Expect = 5.4
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -2
Query: 343 TCLFLXR-HDL*NLIIQGRAEEEIND-LEF-FDGKENK*MLSSLSIFP-SRT 200
TCLF R HDL +LI++G ++EEI D + + + KE + + P SRT
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 266 EIIDFFLGPSLNDEVLKIMPVQKQ 337
+II+FFLG L DEVL+ M Q Q
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQNQ 74
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 150 RAHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHRLEQR 31
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 287 GPSLNDEVLKIMPVQKQTRAGQRTRXKAXVAIGDNXGHIGLG 412
G L ++++ I V K + G+R A V +GD G +G G
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFG 97
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,678,787
Number of Sequences: 1657284
Number of extensions: 5822278
Number of successful extensions: 16583
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 15577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16444
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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