Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0237.Seq
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PSL7 Cluster: ENSANGP00000004080; n=1; Anopheles gamb... 38 0.23
UniRef50_Q6ZN55 Cluster: Zinc finger protein 574; n=18; Theria|R... 37 0.41
UniRef50_Q17G48 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q17BP6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_UPI00004D8EC4 Cluster: Zinc finger and BTB domain-conta... 33 3.8
UniRef50_Q28BT2 Cluster: Novel zinc finger protein; n=1; Xenopus... 33 3.8
UniRef50_O53776 Cluster: Putative uncharacterized protein; n=11;... 33 3.8
UniRef50_Q64M80 Cluster: HGWP repeat containing protein-like; n=... 33 5.0
UniRef50_Q1RL92 Cluster: Zinc finger protein; n=1; Ciona intesti... 33 5.0
UniRef50_Q9P243 Cluster: Zinc finger protein 406; n=23; Amniota|... 33 5.0
UniRef50_UPI0000F1DA1C Cluster: PREDICTED: similar to zinc finge... 33 6.7
UniRef50_UPI0000D56252 Cluster: PREDICTED: similar to zinc finge... 33 6.7
UniRef50_Q9VGK1 Cluster: CG18476-PA; n=4; Sophophora|Rep: CG1847... 33 6.7
UniRef50_Q5L3Q7 Cluster: tRNA pseudouridine synthase A; n=11; Ba... 32 8.8
>UniRef50_Q7PSL7 Cluster: ENSANGP00000004080; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000004080 - Anopheles gambiae
str. PEST
Length = 375
Score = 37.5 bits (83), Expect = 0.23
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = -1
Query: 465 AKERSFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRP 361
++ERS+ C C FN+ +L++HL VHA+++ YRP
Sbjct: 139 SQERSYPCTLCPKKFNTSFNLILHLKVHAKNYNYRP 174
>UniRef50_Q6ZN55 Cluster: Zinc finger protein 574; n=18; Theria|Rep:
Zinc finger protein 574 - Homo sapiens (Human)
Length = 896
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYY 334
ER + C +C F +L H LVHA+HF YR EC R++
Sbjct: 548 ERPYRCGDCGKAFTQSSTLRQHRLVHAQHFPYR-CQECGVRFH 589
>UniRef50_Q17G48 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 600
Score = 34.3 bits (75), Expect = 2.2
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 465 AKERSFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKXN 316
++ERS+ C C+ F + +L++HL VHA++ YR PA+ +Y L N
Sbjct: 378 SQERSYQCNLCSKKFATSCNLILHLKVHAKNDNYR-PAKSWIEHYTVLSRN 427
>UniRef50_Q17BP6 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 492
Score = 33.9 bits (74), Expect = 2.9
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYY 334
ERSF+CV CN VFNS H L H E P CT +++
Sbjct: 204 ERSFSCVLCNAVFNSKTKYSNHCLTHGERNFQCP--HCTKKFH 244
>UniRef50_UPI00004D8EC4 Cluster: Zinc finger and BTB
domain-containing protein 24 (Zinc finger protein 450).;
n=2; Xenopus tropicalis|Rep: Zinc finger and BTB
domain-containing protein 24 (Zinc finger protein 450).
- Xenopus tropicalis
Length = 604
Score = 33.5 bits (73), Expect = 3.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1
Query: 516 NRAIS*AFT*REITSCTAKERSFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRY 337
N+A++ + E S A ++SFTC C F+ R L H + H P ++ T Y
Sbjct: 341 NKALATKHSLMEHMSLHAGKKSFTCDQCGKYFSQKRQLKSH--YRVHTGMMPRSDITRMY 398
Query: 336 YL 331
YL
Sbjct: 399 YL 400
>UniRef50_Q28BT2 Cluster: Novel zinc finger protein; n=1; Xenopus
tropicalis|Rep: Novel zinc finger protein - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 283
Score = 33.5 bits (73), Expect = 3.8
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 465 AKERSFTCVNCNGVFNSIRSLLMHLVHAEHFAYR--PPAEC 349
A+ FTC C F S RSL +H HA H A R P AEC
Sbjct: 208 AEYNPFTCTECGKSFFSKRSLRLH--HATHTALRHFPCAEC 246
>UniRef50_O53776 Cluster: Putative uncharacterized protein; n=11;
Corynebacterineae|Rep: Putative uncharacterized protein
- Mycobacterium tuberculosis
Length = 252
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 GALRRRSVSKVLGVH*MH-QKRPNRIEYAIAIDARKGPLLRCARCN 480
G L+RR+++ L VH H +++ + + ++ R PL RC RCN
Sbjct: 147 GLLKRRAITHGLFVHSQHPEEQALEVLRRLDLNGRLAPLSRCLRCN 192
>UniRef50_Q64M80 Cluster: HGWP repeat containing protein-like; n=1;
Oryza sativa (japonica cultivar-group)|Rep: HGWP repeat
containing protein-like - Oryza sativa subsp. japonica
(Rice)
Length = 614
Score = 33.1 bits (72), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 178 HPYSLYASAIGHVVSRSHPPRCPRRNATFEPPKRV 282
HP+ + A V+ RSH P C RR PP R+
Sbjct: 27 HPWRVRLRASRRVLGRSHQPACLRRRRLVSPPTRL 61
>UniRef50_Q1RL92 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1089
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 480 ITSCTAKERSFTCVNCNGVFNSIRSLLMHLVHAEHF 373
++S + + + TC CN F+S++SL H A HF
Sbjct: 463 LSSPSETDLALTCTECNAKFSSMKSLTEHRFSASHF 498
Score = 32.7 bits (71), Expect = 6.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMHLVHAEHFAYRP 361
E+ TC+ C +F S++ L +H++ +H+ P
Sbjct: 314 EKVLTCMGCGNLFESLQDLSVHMIKTKHYENVP 346
>UniRef50_Q9P243 Cluster: Zinc finger protein 406; n=23;
Amniota|Rep: Zinc finger protein 406 - Homo sapiens
(Human)
Length = 1243
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 450 FTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKXNINM 307
FTC CN VF SL HL +H Y+ P +C++ ++ N+++
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCP-QCSYASAIKANLNVHL 318
>UniRef50_UPI0000F1DA1C Cluster: PREDICTED: similar to zinc finger
protein 41,; n=5; Danio rerio|Rep: PREDICTED: similar to
zinc finger protein 41, - Danio rerio
Length = 785
Score = 32.7 bits (71), Expect = 6.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 462 KERSFTCVNCNGVFNSIRSLLMHLV--HAEHFAYR-PPAECTFRYYLELKXNINMLAKNK 292
KE +TC C+ F SL HL+ H+E Y+ TF LK ++N A+ K
Sbjct: 600 KEEPYTCHQCDETFRWSNSLKYHLLRHHSEVLQYKCDQCPKTFAKASYLKTHLNTHAQEK 659
Query: 291 Y 289
Y
Sbjct: 660 Y 660
>UniRef50_UPI0000D56252 Cluster: PREDICTED: similar to zinc finger
protein 560; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to zinc finger protein 560 - Tribolium castaneum
Length = 308
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 468 TAKERSFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAEC 349
T E+ + C C F S RSLLMHL +HA + P +EC
Sbjct: 186 THSEKKYECRVCTKKFKSNRSLLMHLKIHANERDF-PCSEC 225
>UniRef50_Q9VGK1 Cluster: CG18476-PA; n=4; Sophophora|Rep:
CG18476-PA - Drosophila melanogaster (Fruit fly)
Length = 936
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 456 RSFTCVNCNGVFNSIRSLLMHL--VHAEHFAYRPPAECTFRYY 334
++F C C VF+ +SL +HL VHAE P C+ ++Y
Sbjct: 486 QTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFY 528
>UniRef50_Q5L3Q7 Cluster: tRNA pseudouridine synthase A; n=11;
Bacillaceae|Rep: tRNA pseudouridine synthase A -
Geobacillus kaustophilus
Length = 258
Score = 32.3 bits (70), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 157 RPH*CMWHPYSLYASAIGHVVSRSH 231
R H C WHPYSL+ SA+ + H
Sbjct: 126 RRHYCAWHPYSLHISAMNEALRLLH 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,845,807
Number of Sequences: 1657284
Number of extensions: 10985434
Number of successful extensions: 30547
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30542
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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