Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0237.Seq
(594 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 26 0.21
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 26 0.21
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 26 0.21
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 0.28
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 23 1.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 1.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.9
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 3.4
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 7.8
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 26.2 bits (55), Expect = 0.21
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRY 337
E+ + C++CN F+ +L H+ H+ +R P C R+
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV-CDRRF 59
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 26.2 bits (55), Expect = 0.21
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRY 337
E+ + C++CN F+ +L H+ H+ +R P C R+
Sbjct: 275 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV-CDRRF 315
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 505 YRSVRVQASSPRRR 546
Y+SV + SSPRRR
Sbjct: 223 YKSVPMSFSSPRRR 236
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 26.2 bits (55), Expect = 0.21
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPA 355
E+ F C C G F L+ H E A R PA
Sbjct: 244 EKPFECDKCRGRFRRRHHLVHHKCGGEEEAERAPA 278
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 468 TAKERSFTCVNCNGVFNSIRSLLMH 394
++++R FTC CN F L H
Sbjct: 129 SSRDRPFTCEVCNRSFGYKHVLQNH 153
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 447 TCVNCNGVFNSIRSLLMHLVHAEHF 373
TC C+ F+S++ L H+V H+
Sbjct: 549 TCKVCDQAFSSLKELSNHMVKNSHY 573
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -1
Query: 444 CVNCNGVFNSIRSLLMHLVHAEHFAYRPP 358
CV C F S+ ++ H+ A+H P
Sbjct: 380 CVWCKQSFPSLAAMTTHMKEAKHCGVNVP 408
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 459 ERSFTCVNCNGVFNSIRSLLMH 394
+R F C CN F +LL+H
Sbjct: 77 KRQFICKYCNRQFTKSYNLLIH 98
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 291 YVYYSFGRFKCGV 253
Y+ Y+FG+F C V
Sbjct: 143 YICYAFGKFSCKV 155
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 291 YVYYSFGRFKCGV 253
Y+ Y+FG+F C V
Sbjct: 376 YICYAFGKFSCKV 388
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 291 YVYYSFGRFKCGV 253
Y+ Y+FG+F C V
Sbjct: 376 YICYAFGKFSCKV 388
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 184 MGATYINEDASAVE*DAKQILWRS 113
+GA ++NE + ++ D +IL R+
Sbjct: 180 LGADWLNEQRAVIDFDNNEILLRN 203
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.0 bits (42), Expect = 7.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 509 ALFAFKLRLRDGALVVHIXKRMFD 580
AL KLRL DG + I ++ D
Sbjct: 113 ALVPRKLRLADGGKTLEINYKLID 136
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,234
Number of Sequences: 336
Number of extensions: 2942
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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