Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0234.Seq
(591 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 27 0.16
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 24 1.1
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 23 1.5
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 1.9
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 1.9
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 2.6
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 2.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 3.4
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 4.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.5
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 7.8
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 21 7.8
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 7.8
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 7.8
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 26.6 bits (56), Expect = 0.16
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 37 QNSSNKSFNDGDASADYQTKS---KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREK-EQ 204
+ K +D +A + + + K +K D E E DT+ D K + +EK +
Sbjct: 216 EKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275
Query: 205 SSRVNQSKGSNSRDSSD 255
+N++K +R++ D
Sbjct: 276 DEELNKTKPIWTRNADD 292
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 306 CQSTFLFLYSLFGQICL--IRGIPRVAALTLIH 214
C S Y+ GQI +GIPR+A+L L H
Sbjct: 395 CLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGH 427
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 436 LGSLDRMTPEHVLQKPKRNMSGSHRRNTFRATRK 537
L L + P H+L K+N H N F A R+
Sbjct: 264 LCKLIQSIPTHLLDSEKKNFIVDHISNQFVAFRR 297
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.0 bits (47), Expect = 1.9
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 231 QQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKY 410
QQ+ G D N E E S K + GG+++ + +N ++++
Sbjct: 31 QQIYGIWADDSD----NDEEERPSFKSRKPKNYSAPIGFVAGGVQQAGKKPENVKKEDES 86
Query: 411 SEEKERSSTG-KFGSNDS 461
EEK +S K S+DS
Sbjct: 87 DEEKPTTSFKLKDSSSDS 104
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 94 KSKKVEKNSARDKKEKEKTDTRNSDGT 174
KSK+ EK+ + ++ TD DGT
Sbjct: 689 KSKQNEKSPSPQQRSPSVTDLSTKDGT 715
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 427 GVPLGSLDRMTPEHVLQKP 483
GVPL S R TP+ + P
Sbjct: 834 GVPLNSTPRSTPDKREKSP 852
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 91 FGSQPMHRRR*RIYYWSSVHCTPRLYRNSC 2
FG+ ++ R YYW +++ T + SC
Sbjct: 143 FGATKVYNSMKREYYWPNMYRTIKKRLRSC 172
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 372 FFLSNHRYLYFEYVHFLKSARLCQSTFLFLY 280
FF S L+F Y+++ +++ L S L+ Y
Sbjct: 11 FFFSFCCILFFIYLYWQQTSNLTTSKLLYTY 41
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.4
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSSQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/43 (23%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 363 KEKSSQSKNYGRDEKYSEEKERSSTGKF--GSNDSRARSTKAE 485
++ QS + + + E+++RS++ + G ND+R R+++ +
Sbjct: 24 QQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGENDARPRASQVK 66
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 131 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 189
Query: 187 EREKE 201
E EKE
Sbjct: 190 ELEKE 194
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
S+ E+ N+++KS + Y K+V + E R S Y+T
Sbjct: 175 STSSTEKAGTNNNNSKSGQSSNPPQIYPWM-KRVHLGQSTVNANGETKRQRTSYTRYQTL 233
Query: 187 EREKE 201
E EKE
Sbjct: 234 ELEKE 238
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.0 bits (42), Expect = 7.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 451 RMTPEHVLQKPKRNMSGSHRRNTFRATRKNKI 546
R E +PKR S HR+N R+ ++
Sbjct: 245 RTGTELTKMRPKRQSSRRHRKNLKDPCRRRQM 276
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 21.0 bits (42), Expect = 7.8
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 53 NPLTTAMHRLTTKPNLRRLKRILPEIKRKRKKLTQEILTERTK 181
N M R P+ LKR+LP+ + E E TK
Sbjct: 40 NYFNCIMDRGACTPDADELKRVLPDALKSDCAKCSEKQKEMTK 82
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/28 (28%), Positives = 12/28 (42%)
Frame = +1
Query: 433 PLGSLDRMTPEHVLQKPKRNMSGSHRRN 516
P G + +P + P+ GSH N
Sbjct: 89 PAGHEEAQSPHRIYMHPESPSKGSHWMN 116
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 163 NFLCQFFPFPFY 128
NF+ FF PFY
Sbjct: 359 NFVSTFFKIPFY 370
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.313 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,211
Number of Sequences: 336
Number of extensions: 2205
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
- SilkBase 1999-2023 -