Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0234.Seq
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 39 6e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 38 8e-04
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.006
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 35 0.010
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 34 0.013
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 34 0.018
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 31 0.095
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.17
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.22
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 30 0.22
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 30 0.22
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 30 0.29
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 30 0.29
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 30 0.29
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 30 0.29
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 0.51
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.51
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 29 0.67
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.67
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 29 0.67
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 29 0.67
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 0.89
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 28 1.2
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 28 1.2
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 28 1.2
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 28 1.2
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 27 1.5
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 27 1.5
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 27 1.5
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 1.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.0
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.0
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 27 2.0
SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 27 2.0
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 27 2.0
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 27 2.0
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.0
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 27 2.0
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 27 2.0
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 27 2.7
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.7
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 26 3.6
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 26 3.6
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 26 3.6
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 26 3.6
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.6
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 26 3.6
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 3.6
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 26 3.6
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 26 3.6
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 26 4.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.7
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.7
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 26 4.7
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 26 4.7
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 4.7
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 4.7
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 26 4.7
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 4.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 6.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 6.2
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 25 6.2
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 25 6.2
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 25 6.2
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 25 6.2
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 6.2
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 25 6.2
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 25 6.2
SPBC18E5.13 ||SPBC23G7.03|translation initiation factor |Schizos... 25 6.2
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 8.3
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 8.3
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.3
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 25 8.3
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 25 8.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 8.3
SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.3
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 25 8.3
SPBC428.06c |||histone deacetylase complex subunit, RXT2 family ... 25 8.3
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 38.7 bits (86), Expect = 6e-04
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGT--Y 177
+ S D E SE+ +S D + S + +++S+ ++ + E+E ++ S +
Sbjct: 79 EDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSFL 138
Query: 178 KTSEREKEQSSRVNQSKGSNSRDSSDQ 258
K E+E+ + + + +G +S +SSD+
Sbjct: 139 KKPEKEEAKPAGLKFLRGESSEESSDE 165
Score = 33.9 bits (74), Expect = 0.018
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 258 DKSGRKVNKETETYSDKDAQTSE--SERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERS 431
D S + + E E+ S ++++SE SE +S+ K+ + S++ D + SEE+E +
Sbjct: 35 DSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEET 94
Query: 432 STGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQDLTE 554
+ DS S ++E E +S+ + +E++ D +E
Sbjct: 95 ES----EEDSEV-SDESESESESESESEEESESEEESDESE 130
Score = 31.5 bits (68), Expect = 0.095
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 255 SDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDE--KYSEEKER 428
S++ ++E SD+ SESE ++S++ +E+S +S+ G K E++E
Sbjct: 88 SEEEEETESEEDSEVSDESESESESE-SESEEESESEEESDESERSGPSSFLKKPEKEEA 146
Query: 429 SSTG-KFGSNDSRARSTKAEE-EHVRKSQK 512
G KF +S S+ EE V KS K
Sbjct: 147 KPAGLKFLRGESSEESSDEEEGRRVVKSAK 176
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 38.3 bits (85), Expect = 8e-04
Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKE-----KEKTDTRNSD 168
+SS + E S + S S ++ ++S+ +++S E +S+ ++E +EK ++ +
Sbjct: 82 ESSSESESESSSSESESSSSESESSSS-ESESSSSESSSSESEEEVIVKTEEKKESSSES 140
Query: 169 GTYKTSEREKEQSSRVNQSKGSNSRDSSDQTNLAE 273
+ SE E+E ++ + K S+S DSS +++ +E
Sbjct: 141 SSSSESEEEEEAVVKIEEKKESSS-DSSSESSSSE 174
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES + S S+ S + + +E+ + +T E + + S+ + + + +
Sbjct: 96 SESSSSESESSSSESESSSSE-SSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVV 154
Query: 393 GRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEH--VRKSQKKHIQSNEKKQD 545
+EK + SS ++S + S+++EEE V K+++K S+E D
Sbjct: 155 KIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSD 207
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.5 bits (78), Expect = 0.006
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYS---DKDAQTSESERTQSKDNGGLKEKSS-- 377
S S + S GSD S + E+E+ S D + +S+SE S ++ SS
Sbjct: 148 SSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 207
Query: 378 --QSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQD 545
+S + G D S S + NDS + S+ +E E + S++ + +
Sbjct: 208 ESESSSEGSDSSSSSSSSESESSS-EDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 264
Score = 33.9 bits (74), Expect = 0.018
Identities = 22/114 (19%), Positives = 42/114 (36%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES S SD ++ +++ S + SES + + + S+S +
Sbjct: 137 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 196
Query: 393 GRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQDLTE 554
D S S + GS+ S + S+ E + S+ + + +E
Sbjct: 197 DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 250
Score = 33.9 bits (74), Expect = 0.018
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES+ + + S + ++ S + SESE + + SS+S++
Sbjct: 171 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS 230
Query: 393 GRD-EKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQD 545
D + S + S +DS + S+ +E E K S++ + D
Sbjct: 231 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDD 282
Score = 33.5 bits (73), Expect = 0.024
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES S SD ++ +++ S + SES + + + S+S +
Sbjct: 191 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 250
Query: 393 GRD-EKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQDLT 551
D S + E S+ K +DS + S+ +E++ S +S+ + D T
Sbjct: 251 DSDSSSSSSDSESESSSK--DSDSSSNSSDSEDDSSSDSSDSESESSSEDSDST 302
Score = 32.3 bits (70), Expect = 0.054
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYS-DKDAQ----TSESERTQSKDNGGLKEKSS 377
S S + S GSD S + E+E+ S D D+ SESE + + S
Sbjct: 202 SSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 261
Query: 378 QSKNYGRD-EKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEK 536
+S++ +D + S + S+DS + S+ + + S S+ +
Sbjct: 262 ESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSE 315
Score = 31.5 bits (68), Expect = 0.095
Identities = 23/114 (20%), Positives = 39/114 (34%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES S SD ++++++ S SES S + S+S +
Sbjct: 119 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 178
Query: 393 GRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQDLTE 554
D S S + S+ S + S E S S+ + + +E
Sbjct: 179 DNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 232
Score = 31.1 bits (67), Expect = 0.13
Identities = 22/111 (19%), Positives = 42/111 (37%)
Frame = +3
Query: 213 SESK*GQQLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNY 392
SES+ + + S + ++ S + SESE + + SS+S++
Sbjct: 117 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS 176
Query: 393 GRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQD 545
D S S + S DS + S+ ++ E S+ S+ +
Sbjct: 177 SEDND-SSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE 226
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 34.7 bits (76), Expect = 0.010
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSERE 195
K +++S + S K + G A KK+EK + + KKE +K D +S K+ +
Sbjct: 167 KRKKHSSKKKSKKKTSTGSA-----LDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSD 221
Query: 196 KEQSSRVNQSKGSNSRDSSDQTNLAEK 276
KE+ + K +D + T+ EK
Sbjct: 222 KEEKKK----KKIKLKDKPESTSSVEK 244
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +3
Query: 264 SGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGK 443
S +K K+T T S D + E + K K+K S SK EEK++
Sbjct: 173 SKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKL 232
Query: 444 FGSNDSRARSTKAEE 488
+S + K +E
Sbjct: 233 KDKPESTSSVEKVKE 247
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 34.3 bits (75), Expect = 0.013
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Frame = +3
Query: 255 SDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRD-----EKYSEE 419
S K N D D + + E ++S + K+K S+SK+ G + + S E
Sbjct: 116 SSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSE 175
Query: 420 KERSSTGKFGSND---SRARSTKAEEEHVRKSQKKHIQSNEKKQD 545
K++ K ND + R T+ +EE RK ++S K D
Sbjct: 176 KDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASM-LESENKDND 219
Score = 28.3 bits (60), Expect = 0.89
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKT 183
+ S E+ ++ +KS +DG + D +E +S +DKK+K+K+ N D K
Sbjct: 141 EESESSEKSKKKKKKSKSKDDGSEALD----DGDIE-SSEKDKKKKKKS-KENDDAPKKD 194
Query: 184 SE-REKEQSSR 213
+ R+KE+ +R
Sbjct: 195 RKTRKKEEKAR 205
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASA---DYQTKSKKVEKNSA--RDKKEKEKTDTRNSD 168
KS K ++ ++ +++ +DGD + D + K K E + A +D+K ++K +
Sbjct: 148 KSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKL 207
Query: 169 GTYKTSEREKEQSSRVNQSKGSNSRD 246
+ SE + ++ +K +D
Sbjct: 208 ASMLESENKDNDANAAPLNKTDAFKD 233
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 33.9 bits (74), Expect = 0.018
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQT-KSKKVEKNSARDKKEKEKTD-------TR 159
++ K E S+ +++++SF + A D T + + +++ K EK K++ ++
Sbjct: 124 RNKAKSSETSDSSNTSQSFKENRALKDTATSRPLALSSDTSYQKSEKAKSEKSPFLSTSK 183
Query: 160 NSDGTYKTSEREKEQSSRVNQ 222
NSD Y + +KE V+Q
Sbjct: 184 NSDANYSKTTNQKEAEKAVSQ 204
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 31.5 bits (68), Expect = 0.095
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 285 ETETYSDKDAQTS-ESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDS 461
E +YSD A++ +S K G+KEK + +D+ + + + ++ ND+
Sbjct: 221 EDPSYSDSIARSPVKSAFNLRKRRKGVKEKKILKTYHSQDKDTASDNDNNTGSSDEENDN 280
Query: 462 RARSTKAEEEHVRKSQKKHIQSNEKKQ 542
T ++E++ KS KK+ Q + Q
Sbjct: 281 LKELTPGKKEYL-KSIKKYFQDVDDYQ 306
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.17
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 261 KSGRKVNKETETYSDKDAQTSESERTQSKDNGG----LKEKSSQSKNYGRDEKYSEEKER 428
K VN+ET + + +TS++ +++SKD+ + K K + + K + K
Sbjct: 56 KKDTLVNRETPSKKSQKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHKVKKVKSP 115
Query: 429 SSTGKFGSNDSRARSTKAEEEHVRKSQKKH 518
G N + T + E +K ++KH
Sbjct: 116 KKEKLVGKNPAEKEDT-TDVEDTQKLEQKH 144
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 264 SGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKE 425
+G+KV TE D Q+ + + SK + KEK + R + +EE++
Sbjct: 703 TGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRKHRETEEED 756
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEK--EKTDTRNS 165
+ S S+ S +K + +A + + +S + K++ +DKK+K +K D++ S
Sbjct: 582 QGSSLSRRASKHESKHKRDSKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRS 637
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 30.3 bits (65), Expect = 0.22
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 64 DGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 213
D D +T S+K K +DKKEK+K ++ SE K+ +
Sbjct: 444 DIDVEETVETISEKPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 97 SKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 210
SKK +K+ KKEK K D + + + +K++ S
Sbjct: 459 SKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKKKKS 496
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 30.3 bits (65), Expect = 0.22
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +3
Query: 324 ESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRK 503
ESE + DN GL E + SK E EE E S+ + +D + E RK
Sbjct: 180 ESEEKATNDNNGLIETNHNSKLEESSEHEEEEDEESNIERTEDSDHQIPQRGGTLEAPRK 239
Query: 504 SQKKHIQSNEKKQDLTE*LNTRW 572
+ + K++ T ++ +W
Sbjct: 240 GGPRSGVGSRKRKRAT--VSRKW 260
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.29
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +1
Query: 43 SSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 222
SS + D + A ++S+ + +KEKE+T + + G+++ E + SR ++
Sbjct: 108 SSTNTEKDSRSIAHSTSRSRSTSPANRHRRKEKERTRSNHRHGSHRRHEPYRTHLSRHHR 167
Query: 223 SKGSNSRDSSD 255
+N D
Sbjct: 168 HSTTNYHSKRD 178
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 29.9 bits (64), Expect = 0.29
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSERE 195
++ S NS+N S + + A+++T + ++ RD+ + K + D + +++ R+
Sbjct: 1481 RNPRVSNNNSTNVS-RERSSEANHRTSN-----DNKRDEVTEGKDKNKRQDISGESNSRQ 1534
Query: 196 KEQSSRVNQSKGSN-SRDSSD 255
SR +S GSN DS D
Sbjct: 1535 NNAISRAGRSNGSNRGNDSRD 1555
Score = 28.7 bits (61), Expect = 0.67
Identities = 17/86 (19%), Positives = 33/86 (38%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTS 186
+ K +E +E NK D S + ++ + R D+R++DG T
Sbjct: 1507 NDNKRDEVTEGKDKNKR---QDISGESNSRQNNAISRAGRSNGSNRGNDSRDADGRRSTH 1563
Query: 187 EREKEQSSRVNQSKGSNSRDSSDQTN 264
++ + SN R+ ++ N
Sbjct: 1564 YASNKRPRSSDSQSPSNLREEDEREN 1589
Score = 26.6 bits (56), Expect = 2.7
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 1/98 (1%)
Frame = +3
Query: 255 SDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKER-S 431
SD R+ T + ++ +S +E R E S++ +R
Sbjct: 1415 SDSKLREDQSRDRTPQSRSFTNENNDNLRSVSRHTRREPQQAQNLNARREHESQKSDRWR 1474
Query: 432 STGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQD 545
G N + + R S+ H SN+ K+D
Sbjct: 1475 QNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNKRD 1512
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKT 183
+ G +EE E + DGD + K + E+ D +E+E+ + +
Sbjct: 193 EGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDIEEEEEESALANASAAEE 252
Query: 184 SEREKEQSSR 213
EK ++S+
Sbjct: 253 KPEEKPETSQ 262
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.9 bits (64), Expect = 0.29
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +1
Query: 82 DYQTKSKKV--EKNSARD--KKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDS 249
D + + K++ E+N +D K EK++ + + +G T E+ + SS +++KGS S+D
Sbjct: 196 DNKEEDKEIHSEENETKDEIKSEKKEPEIKKQEGGSST-EKVGQPSSSDDKAKGSTSKDQ 254
Query: 250 SDQ 258
+
Sbjct: 255 PSE 257
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 29.1 bits (62), Expect = 0.51
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +1
Query: 82 DYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSD 255
D + + VE + +KK+K+ + + +DG E+++++ + +SK S +S D
Sbjct: 437 DAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSK-RKSEESED 493
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 97 SKKVEKNSARDKKE-KEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRD 246
SK E + KKE KEK D ++ K+ E E +S + + K S+D
Sbjct: 459 SKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPK-KKKKSKKSKD 508
Score = 25.4 bits (53), Expect = 6.2
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +3
Query: 306 KDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAE 485
KDA+ S+ + K+KSS+ K + E+KE+ S+ +S ++E
Sbjct: 436 KDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDK---KHKKSKRKSEESE 492
Query: 486 EEHVRKSQKKHIQSNE 533
+ K +KK +S +
Sbjct: 493 DGESPKKKKKSKKSKD 508
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.51
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +3
Query: 282 KETETY--SDKDAQTSESERTQSKDNGGLKE---KSSQSKNYGRDEKYSEEKERSSTGKF 446
KET++ +DKD +T E + KE K+ ++ + D+K + + + K
Sbjct: 461 KETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKV 520
Query: 447 GSNDSRARSTK-AEEEHVRKSQK-KHIQSNEKKQDLTE 554
DS+ + K A++++ ++K + + S + K+ + E
Sbjct: 521 EQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIEE 558
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/87 (17%), Positives = 40/87 (45%)
Frame = +3
Query: 255 SDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSS 434
+DK + +KETE ++ + + D+ + +K ++ + +K + + +
Sbjct: 469 NDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDT 528
Query: 435 TGKFGSNDSRARSTKAEEEHVRKSQKK 515
K +D++ + KAE+ + ++K
Sbjct: 529 NEKPAKDDNKEANEKAEKVDSKDVKEK 555
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 0.67
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 88 QTKSKKVE-KNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSDQTN 264
+TK++K + K A+ K KEK + +KT + KE S++ SK SR++ D+ +
Sbjct: 89 ETKTEKAKVKPKAKKKNSKEKISKSSKQDEHKT-DVHKESVSKL--SKNLESRNNRDENS 145
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 0.67
Identities = 21/102 (20%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 LGSDKSGRKVNKETETYSDKDAQTSE-SERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKE 425
L DK+ +++++ E ++ + +SE SE T +++ KS++S+ +E EE
Sbjct: 72 LNQDKATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKSTKSEELTDEESEDEEVY 131
Query: 426 RSSTGK-FGSNDSRARSTKAEEEHVRKSQKKHIQSNEKKQDL 548
+ G+ S + + AE E + + + E ++++
Sbjct: 132 DPARGEGIISTSESSDESDAESETEAQPEISELAGIEPEENI 173
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 28.7 bits (61), Expect = 0.67
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = +3
Query: 255 SDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSS 434
S K+G K + T++ +K S+ +KD L E S+ KN ++ ++E +
Sbjct: 78 SSKAGAKEKQNTDSQKEKKQNKSKEALADAKD--PLDESSNGIKNLSLNK--NDEPAFQT 133
Query: 435 TGKFGSNDSRARSTKAEEEHVRKSQKKHIQS 527
G+ +S + E++ ++K + S
Sbjct: 134 NGEVKMKNSSESDNQPEKKKIKKQNPTDLVS 164
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 28.7 bits (61), Expect = 0.67
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +3
Query: 282 KETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDS 461
+ + +YSD+D ++ S ++ + + SS+S Y + + + K + G N +
Sbjct: 320 RRSRSYSDEDEESVYSSDVSTESS---SQFSSRSSEYSKPSRPTAPKPKFKQDSLGPNQA 376
Query: 462 RARSTKAEEE 491
RA + A E+
Sbjct: 377 RAMYSFAGEQ 386
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.3 bits (60), Expect = 0.89
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +1
Query: 31 SEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 210
S Q+S +K ND + + + + KV + +KK+ K R + + T +
Sbjct: 560 SSQSSLDKLRNDAEENRNILSSKLKVLSDLKGEKKDVSKNIERKKETVHNTYRNLMSNRT 619
Query: 211 RVNQSKGSNSRDSS 252
++ + K S S S
Sbjct: 620 KLEEMKASLSSSRS 633
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKE 144
+D S SS K+F S KKVE+N A D+ K+
Sbjct: 595 RDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKD 637
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 7 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK--VEKNSARDKKEKEKTDTRNSDGTYK 180
S+ ++EE + N S +S+ +S+DYQ +S++ E+ + R + KEK R +
Sbjct: 161 SNEREEEVEDDNRSVESY----SSSDYQARSRRRFSEETTQRRAEIKEKRKKRKEFASIL 216
Query: 181 TSEREK 198
+ EK
Sbjct: 217 SEYYEK 222
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = +3
Query: 276 VNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSN 455
+ T + + + KD G ++S Q N E EKE+ N
Sbjct: 67 IKSVTNKIDTNKLEAKDESKNVEKDATGNPQESKQEPNL---EVQQTEKEKDVDSASAEN 123
Query: 456 DSRARSTKAEEEHVRKSQKKH 518
+S S+ + +E ++Q KH
Sbjct: 124 ESINSSSSSSKECSTQTQSKH 144
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 282 KETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDS 461
KE E Y + + ++ E+ ++K+N +E + G D++YS E E +
Sbjct: 40 KENEGYEELE-KSGEAGAERTKENPFREEPGADFDRSGSDQQYSAEAEANQEDDLNETSQ 98
Query: 462 RA 467
+A
Sbjct: 99 QA 100
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.5 bits (58), Expect = 1.5
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 1 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYK 180
RKS GKD+ E + K D D A + ++++ ++ D ++ +Y+
Sbjct: 1346 RKSGGKDDTVPEVGQALKPLEDID-EAPIEGRAQEALEDEDNDATNEKMVSRSKQHASYE 1404
Query: 181 TSEREKEQSSRVNQSKGSN 237
+ + + R Q KGSN
Sbjct: 1405 GPDEADKVALR--QLKGSN 1421
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 88 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSDQTN 264
Q K++EK R+ K+K K K REK S K S+ +D + N
Sbjct: 24 QNPLKELEKILERNNKQKNKKSRNQVRREKKKLLREKTNSGAKLAEKNSDDKDQLTENN 82
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.5 bits (58), Expect = 1.5
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSERE 195
K E +++ + ++ N+G+ + +KKV+KN+ ++ +E EK D + T E
Sbjct: 109 KAERKTKRPRARRAANEGEHNES--VPAKKVKKNTVKE-EEIEKDDESATTETPVKEEPT 165
Query: 196 KEQSSRVNQSKGS-NSRDSSDQT 261
E++ ++ K S + + SD+T
Sbjct: 166 GEETEADHEEKASVDHGNFSDKT 188
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.5 bits (58), Expect = 1.5
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +1
Query: 19 DEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREK 198
+EE S S +K + D S +K+EK + + KE+ + NSD + + K
Sbjct: 1303 EEELSNLYSLSKDLSFTDISGHIPNSIRKLEKGLSTLSELKERLNASNSD--RPSPDIFK 1360
Query: 199 EQSSRVNQSKGSNSRDSSDQTNL 267
+ + +N K ++ +S Q+ L
Sbjct: 1361 DTQAIMNSRKLLSNPNSDAQSGL 1383
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 318 TSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHV 497
TS S +Q KD + K+ N +D+K E KER + + +A + +E +
Sbjct: 137 TSRSTSSQEKDELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQT 196
Query: 498 RKSQKK 515
S+++
Sbjct: 197 LVSKRE 202
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 321 SESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARST-KAEEEHV 497
S+++ T DN G E +++++ DE+ S ++T G +D+ ST +A E
Sbjct: 391 SQNQTTSVSDNTGPNENVNEAEHISEDEQAS-----TATDVNGISDNNGSSTQQAPETRN 445
Query: 498 RKSQKKH 518
SQ H
Sbjct: 446 NNSQTDH 452
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 2.0
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 306 KDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSND--SRARST- 476
K + S T S+ KSS + +K S++ +S + + SND S A ST
Sbjct: 171 KSYRPKASRTTSSQSVASTMTKSSTKTS---KKKSSKKNSKSESNQDSSNDRSSTAPSTA 227
Query: 477 KAEEEHVRKSQK-KH 518
++ EH+ SQK KH
Sbjct: 228 ESNNEHLSSSQKSKH 242
>SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +3
Query: 303 DKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKA 482
++D S S +D G +S ++N R +++ SS G GS K+
Sbjct: 55 EEDDMESSSYHATQEDIGDDDSRSESTRN--RSSQHTGRVNFSSLGGLGSIFG---GKKS 109
Query: 483 EEEHVRKSQKKHIQSNEKKQDLTE 554
+ +QKK+ +NE++ D E
Sbjct: 110 RSKSANGTQKKNANNNEEQLDEEE 133
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 321 SESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVR 500
SES T S D+GG +E S + D S +S+ + S+D ++ +++ H R
Sbjct: 2 SESVTTGSDDDGGDRESSPVMLSQSFDPMSSSS---NSSSEENSDDDYEKTISSKKRHPR 58
Query: 501 KSQK 512
+ K
Sbjct: 59 PNSK 62
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKT 183
KSS + + S SF AS+ T + K ++ T + K
Sbjct: 379 KSSNSKSKKKVTSISGTSFFKNLASSTKPTSASSSTKAPLTKQQTNPSTPLSSIMAGLKG 438
Query: 184 SEREKEQSSRVNQSKGSNSRD 246
E+EK++ S ++ SN+R+
Sbjct: 439 REKEKDKDSGISSENVSNNRE 459
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQT 93
K +S + SSN S ND DAS D T
Sbjct: 168 KKNNFSVKESSNLSNNDSDASLDEDT 193
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 234 QLSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSK 386
+L L S K + KETE + + +E E+T+ + L EKS + K
Sbjct: 1572 RLRSQLESTKQYYEKEKETEILAARSELVAEKEKTKEELENQLNEKSQRIK 1622
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +1
Query: 91 TKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSDQTN 264
T+ ++++KN +KEK++ +T+ + T K ++ K+Q + +N+ + N + +Q N
Sbjct: 1352 TQLEELKKNCEALEKEKQELETKLQE-TAKETDTFKQQVNSLNE-EVENLKKEVEQAN 1407
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 486 EEHVRKSQKKHIQSNEKKQDLTE 554
E+ +R S+KK +QSNE + DL E
Sbjct: 63 EQQLRNSEKKLLQSNE-RYDLLE 84
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/89 (22%), Positives = 36/89 (40%)
Frame = +3
Query: 270 RKVNKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFG 449
R+ K E S + + ++ + NG +E+ S YG YSE+ E + +
Sbjct: 248 RQAEKYEEERSRARRRLEKRKQLNNYQNGTGEEEEDYSSFYGPRSTYSEQNEIIDSDRM- 306
Query: 450 SNDSRARSTKAEEEHVRKSQKKHIQSNEK 536
R + K E + K ++ NE+
Sbjct: 307 ---DRLKRIKQEGAGQYRGYNKDLEENEE 332
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 DAQTSESERTQSKDNGGLKEKSSQSKNYGR-DEKYSEEKERSSTGKFGSNDSRARSTKAE 485
DA ESE +++ G+KE Q +E ++ KE+ K G + + K +
Sbjct: 180 DAVGPESE-PEAEPKSGIKEHILQETGDATVEELQNKGKEKQKELKKGKREKKDEEEKPK 238
Query: 486 EEHVRKSQKK 515
++ +KS KK
Sbjct: 239 KKKQKKSSKK 248
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 363 KEKSSQSKNYGRDEKYSEEKER-----SSTGKFGSNDSRARSTKAEEEHVRKSQKK 515
KE ++ SK + +K S EK + SSTG+ + S + +H R+ K+
Sbjct: 462 KETTTASKRVSKHDKASAEKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQ 517
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 237 LSGFLGSDKSGRKVNKETETYSDKDAQTSESERTQSKDNGG--LKEKSSQSK 386
L +LGSD+S ET ++++ SES+ + +DN G K K+ +K
Sbjct: 226 LEDWLGSDQS-----METSESEEEESSESESDEDEDEDNKGKIRKRKTDDAK 272
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +3
Query: 303 DKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEK-------ERSSTGKFGSNDS 461
DKDA ++E + + +D +K S+++ G D + + E+ S+ N+S
Sbjct: 10 DKDANSTEVDAAE-QDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNES 68
Query: 462 RARSTKAEEEHVRKSQKKHIQSNEKKQD 545
+T + E +++ ++ +N+KK+D
Sbjct: 69 PNDTTINKGEDGNENEVDNVNNNDKKED 96
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 279 NKETETYSDKDAQTS-ESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSN 455
NK+ ++ Q + + + DN +K +Q KNY + + Y + S K GS+
Sbjct: 125 NKKATALANASVQNERQMPSSMTLDNSEIKPVLNQRKNYLKPDPYQLPEMDVSFDKLGSS 184
Query: 456 -DSRARSTKAEEEHVRKSQK 512
D R S ++V K
Sbjct: 185 YDPRIMSQDELTQYVSSFTK 204
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGD-ASADYQTKSKKVEKNSARDKKEK 141
K GK + + S K+ + A + Q K +K +K +DKKEK
Sbjct: 220 KKEGKPSQEASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKDKKEK 266
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +1
Query: 1 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYK 180
RK+ +E + ++S S + D+ + Q +++E K+E+ + +N +
Sbjct: 139 RKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQE 198
Query: 181 TSERE 195
ERE
Sbjct: 199 KRERE 203
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/59 (22%), Positives = 27/59 (45%)
Frame = +1
Query: 22 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREK 198
E E++ + + D D +TK + ++ ++EKE+ +D T E+E+
Sbjct: 88 ETKEEESLKHAREENDDLHLDKETKKRLKKEKKKAARREKEEARKAKADTTQGVGEKEQ 146
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +1
Query: 19 DEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREK 198
DEE NS ++ S + +EK S + ++ + + + +++ E
Sbjct: 186 DEEIESFNSFSRKMQTISNSRYRGSPKPNIEKQSCSSESDRVSQISDDEEDEEGSADEED 245
Query: 199 EQSSRVNQSKGSNSRD 246
E+ S V S+ S S D
Sbjct: 246 EEDSDVELSESSLSDD 261
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 89 KPNLRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE 214
+ N R K+++ E RK++++ + ILT+R KK++ E
Sbjct: 57 RENARMRKKVIEE-NRKKEEIEERILTDRILQQERKKSHANE 97
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 3.6
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRN---SDGT 174
KS+ + E ++ SSN++ A+ Q A KKE E++ S T
Sbjct: 232 KSATEAEAKEKETSSNQTATGTAATTTNQFSFNTAANPFAFAKKENEESKPLTPVFSFST 291
Query: 175 YKTSEREKEQSSRVNQSKGSNSRDSSDQTN 264
S +++ + +++K S S +S N
Sbjct: 292 TMASADASKETKQTHETKDSKSEESKPSNN 321
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 321 SESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVR 500
+ SE+T+S++ K Q++ +D + + FGS S ++ E E R
Sbjct: 159 TSSEKTRSENRERKKRWREQNEERNKDNDLRCRVNKKAKKLFGSEPSIEKTNWIEAEFTR 218
Query: 501 KSQKK 515
+ K+
Sbjct: 219 RHTKR 223
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 402 EKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQ 524
E+ S EK R +FG N R EEE +K ++HI+
Sbjct: 233 EEVSAEKARR---QFGKNGIRLSQDAQEEEKQKKKYEQHIK 270
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 130 KKEKEKTDTRNSDGTYKTSE--REKEQSSRVNQSKGSNSRDSSDQTNL 267
K + S+ T K S+ ++KE+ ++Q NSRD + ++
Sbjct: 241 KPRRSYVQNNKSEQTIKPSKQNKQKEEKKTISQGNKPNSRDEDSELSI 288
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 4.7
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Frame = +1
Query: 88 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR---------VNQSK-GSN 237
+ + + +E+ R+K +KE+ + R + K SE EKE+ R NQ+K GS+
Sbjct: 696 EEEKRILEERKRREKLDKEEEERRRRELLEKESE-EKERRLREAKIAAFFAPNQTKEGSD 754
Query: 238 SRDSSDQTNLAEK 276
+S Q L EK
Sbjct: 755 GCTTSSQLGLFEK 767
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 4 KSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKT 183
+++ K E Q + K + + + K +++E+ R++K+K+K + +
Sbjct: 623 QAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQK-REEKQKQKEREKKLKKQQQE 681
Query: 184 SEREK---EQSSRVNQSK 228
++REK EQ R + K
Sbjct: 682 ADREKMAREQRLREEEEK 699
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +1
Query: 28 YSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 207
++ + + N++F+DG + +T ++EK D K + + R +
Sbjct: 190 FNSRVAHNRNFSDGPIVTNLETDQPRIEKKLTIDSSRSAKKKL-----SVEKERRFSDNK 244
Query: 208 SRVNQSKGSNSRDSSD 255
N S+G+ S SD
Sbjct: 245 PSSNVSRGTPSSAHSD 260
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 4.7
Identities = 19/96 (19%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +3
Query: 279 NKETETYSDKDAQTSESERTQSKDNGGLKEKSSQSKNYG-RDEKYSEEKERSSTGKFGSN 455
+KE K+ + + ++ DN +E ++ YG RD S K++ +F ++
Sbjct: 130 SKEAMQQKKKEKRAALKHYREASDN---EEDLKETDLYGDRDSFQSRLKQKKQRSEFRAS 186
Query: 456 DSRARSTKAEEE---HVRKSQKKHIQSNEKKQDLTE 554
+ ++E + + KK +++ EK ++L +
Sbjct: 187 KREMERLERDQELRNKIEERNKKELETIEKLRELAK 222
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.8 bits (54), Expect = 4.7
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 22 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTR-NSDGTYKTSEREK 198
E+Y S +++ A A TKS D + + + +S+ T ++R+
Sbjct: 382 EDYESTTSQLNHYSESGAHAADATKSSVAHNEKVEDISDSDIPIMKTSSNSTSLDADRDS 441
Query: 199 EQSSRVNQSKGSNS-RDSSDQTNLA 270
+ SS + S S++ + + T+LA
Sbjct: 442 DTSSISDTSSNSSAPHEQLNATSLA 466
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 22 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGT 174
EE S + N+ N+ A++ Q + +S + + E ++ +NSDG+
Sbjct: 275 EESSSDDELNELSNEKKANSPTQNVDTSSKLSSVKFQNEDDEDRRKNSDGS 325
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 4.7
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +3
Query: 306 KDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAE 485
K+ +TS S + DN K ++ NY D KYS K + T ++ E
Sbjct: 106 KNHETSLSPSKSTIDNNERK-LDNEIDNYKHDVKYSPYKGQGKTSNPSQGTTKCPGIFEE 164
Query: 486 EEHVRKSQKKHIQSNEK--KQDL 548
+ S K+ EK K DL
Sbjct: 165 DNFFSVSPKRRKNLFEKYGKTDL 187
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 4.7
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1
Query: 420 SLHCTSRLFRNS*IASFFLS 361
+LHC + +FRN + +F++S
Sbjct: 151 ALHCATTVFRNEGLGAFYIS 170
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 4.7
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 306 KDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAE 485
K A+ +E+ +++ +D +EK + K+ DEK+S+ + + + A KAE
Sbjct: 6 KRAEKAEAAKSRKQD----EEK--KKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAE 59
Query: 486 EEHVRKSQKKHIQSNEKK 539
E + K + + + S K
Sbjct: 60 RERLEKEEMESLPSKGGK 77
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 373 ARNLRITEETRSTVKRRRGVPLGSLDRMTPEHVLQKPKRNMSGSHRRNTFRATRKN 540
AR R +++++ VKR++G + PEH+ + K S R+ FRA +++
Sbjct: 55 ARKWRASQKSKFGVKRKQGYVQTEKADLPPEHLRKIMKDRGDMSSRK--FRADKRS 108
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 94 KSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 210
+++K E + +KE++K + + G Y S+++KEQ +
Sbjct: 286 EARKEEARLKKKEKERKKKEEMKAQGKY-LSKKQKEQQA 323
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 37 QNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 210
+ + N + ++ A + K +K R+KKE+EK + K S E +S
Sbjct: 156 KKAQNNNESEAAAPPEIPEVRVKTKKEKEREKKEREKLRKKQQQAKKKGSTGEDTLAS 213
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 25.4 bits (53), Expect = 6.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 234 QLSGFLGSDKSGRKVNKETETYSDKDA-QTSESERTQSKDNGGLKE 368
+LS LG++ S + T T +D TSE + S+DNG LKE
Sbjct: 326 KLSSELGNEISDSDNSISTPTPTDDSRFDTSEFLDSISRDNGWLKE 371
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 339 EYVHFLKSARLCQSTFLFLY 280
+ V FLK +RL S+ LFLY
Sbjct: 835 QIVRFLKGSRLYASSLLFLY 854
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 136 EKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSDQTNLAEK 276
E+E+ SD +SE E+ + + + R SD+T + K
Sbjct: 277 EREEEAEETSDDEPLSSEDEENEDEDITEESNLRKRKVSDKTRVVNK 323
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 1 RKSSG-KDEEYSEQNSSNKSFNDGDASADYQTKSK--KVEKNSARDKKEKEKTDTRN 162
+K SG + ++S+++ + + + Q + + KV+K +KK+K++ TRN
Sbjct: 60 KKGSGERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRN 116
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +1
Query: 82 DYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRDSSDQ 258
+Y+ +++++ + A +++ D + + ++RE+EQ + S SR++SD+
Sbjct: 1200 EYEMRAEQIRNDYAAKCQDEPIPD--DEARLFMQAQREEEQRKQTQDDNISKSREASDE 1256
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 KSGRKVNKETETYSD-KDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSST 437
KS K +E ET + ++A++++ +++ N S+++ G D+K +E K + +
Sbjct: 137 KSKNKNGEEPETSTSVENAESAKGSSDENEANTATAPSSNEAN--GVDKKQNEIKGKGGS 194
Query: 438 GK 443
GK
Sbjct: 195 GK 196
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 6.2
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 339 QSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKH 518
+++ GG+ K++ S + SEE S +G SN+S+ R K + V S +K
Sbjct: 56 ENRVRGGVAAKATDSSSNVTSLASSEENVSSVSGSAKSNNSQQRVWKTD---VAISAEKR 112
Query: 519 IQSNEKK 539
++ +++
Sbjct: 113 TETRQRE 119
>SPBC18E5.13 ||SPBC23G7.03|translation initiation factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.4 bits (53), Expect = 6.2
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1
Query: 450 IQTSQWNSSPSLHCTSRLFRNS*IASFFLSNHRYLYFE 337
IQ S +S C SR F NS AS LSN YF+
Sbjct: 14 IQFSYSLTSVFRKCQSRTFMNSQFASAKLSNSIKKYFD 51
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 369 KSSQSKNYGRDEKYSEEKERSSTGKFGSNDSRARSTKAEEEHVRKSQKKHIQSNEKK 539
KSS +K+ D K + + S G G N S + + +R ++ NE K
Sbjct: 708 KSSSAKSTAADMKPKADSKSISPGFVGGNQSLSSERIPLDPSMRSPLQQQSSENESK 764
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 25.0 bits (52), Expect = 8.3
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 RKSSGKDEEYSEQNSSNKSFNDGDASADY----QTKSKKVEKNSARDKKEKEKTDTRNSD 168
RKS N + + D +S D ++ ++ + S +++ + D R
Sbjct: 199 RKSLNSKRHVDNYNENRRRHYDSYSSYDELERRRSSNESYSRRSELPRRDYNRHDERERY 258
Query: 169 GTYKTSEREKEQSSRVNQSKGSNSRDSSDQ 258
++ ER S N+S RDSS +
Sbjct: 259 SYHRRRERSNSPSYTKNESIPVVDRDSSPE 288
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 43 SSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSE 189
SSN ++D D + SK V + +R K++++ + + D + E
Sbjct: 230 SSNILYSDSDTERQSDSGSKNVARQFSRIKRKRKVLSSSSEDDESSSPE 278
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 QTKSKKVEKNSARDKKEKEKTDTRNS-DGTYKTSEREKEQSSRVNQSKGS 234
Q + EK SAR KK + + + Y+ +ERE+ + +R +++G+
Sbjct: 32 QIVAAAAEKKSARQKKRELIAKRAEAYEAEYRAAEREQIELARKARAEGN 81
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 181 TSEREKEQSSRVNQSKGSNSRDSSDQT 261
T++ KEQS + ++ GSNS +S+ T
Sbjct: 73 TAQLHKEQSLKEDKESGSNSSESNGIT 99
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 279 NKETETYS-DKDAQTSESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKFGSN 455
N + T S + +TSE+ +TQ + + + ++K+ R + E S+ + ++
Sbjct: 51 NADNNTTSFTEQIETSETSKTQDSEGNKVDKNLKENKSIRRKRSIDNDYELSNVKR--ND 108
Query: 456 DSRARSTKAEEEH 494
+ ++ + E EH
Sbjct: 109 ITSGKNREFENEH 121
>SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 218
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 34 EQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTR 159
E NSS FN D S Q + V A++ E +K ++
Sbjct: 31 EINSSRHKFNIADTSVRKQYNEELVFTKDAKENAEAKKVSSK 72
>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 73 ASADYQTKSKKVEKNSARDKKEKEK 147
+S +QT +KK K + KKEK+K
Sbjct: 76 SSHTFQTPTKKGNKTKKKRKKEKKK 100
>SPBC428.06c |||histone deacetylase complex subunit, RXT2 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 242
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 297 YSDKDAQTSESERTQSKDNGGLK-EKSSQSKNYG 395
+ D DA S+S ++ N GLK +K S++ YG
Sbjct: 16 FEDSDASDSDSSIGEALTNRGLKRKKGSKNVYYG 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,084,568
Number of Sequences: 5004
Number of extensions: 40332
Number of successful extensions: 357
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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