Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0234.Seq
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 27 0.34
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 0.79
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 26 1.0
AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methy... 26 1.0
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 4.2
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.4
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.4
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 7.4
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 7.4
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 9.8
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 23 9.8
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 27.5 bits (58), Expect = 0.34
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 324 ESERTQSKDNGGLKEKSSQSKNYGRDEKYSEEKERSST---GKFGSNDSRARSTKAEEEH 494
E + +S+ GG +++ +++ + SEE+E + K G++ + + KA +E
Sbjct: 942 EKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEG 1001
Query: 495 VRKSQKKHIQS 527
+ + QK I S
Sbjct: 1002 LSQKQKGRILS 1012
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 0.79
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 94 KSKKVEKNSARDKKEKEKTDTRNSDGTYKT-SEREKEQSSRVNQSK 228
K +++ + R+++EKE+ + + + +REKEQ R + K
Sbjct: 470 KERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREK 515
Score = 25.4 bits (53), Expect = 1.4
Identities = 9/53 (16%), Positives = 25/53 (47%)
Frame = +1
Query: 88 QTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQSKGSNSRD 246
+ + ++ + R+K+++EK + + ERE+ + R ++ R+
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERE 528
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/63 (17%), Positives = 29/63 (46%)
Frame = +1
Query: 16 KDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSERE 195
K+ E EQ + + + + K ++ + ++++E+E+ + + ERE
Sbjct: 470 KERELREQREREQREKE-QREKEQREKEERERQQREKEQREREQREKEREREAARERERE 528
Query: 196 KEQ 204
+E+
Sbjct: 529 RER 531
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 25.8 bits (54), Expect = 1.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 VNRTPVINPLTTAMHRLTTKPNLRRLKRILPE 127
VN T + P +HR+TT+P ILPE
Sbjct: 360 VNETLRLYPPVATLHRITTQPYQLPNGAILPE 391
>AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA
methylase protein.
Length = 459
Score = 25.8 bits (54), Expect = 1.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 342 SKDNGGLKEKSSQSKNYGRDEKYSEEKERSSTGKF 446
++DNG KE+ + + GR E K++ GK+
Sbjct: 416 AEDNGTRKERRLELREVGRKEAKKRGKQQQPDGKW 450
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 4.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 85 YQTKSKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 222
YQ +VEK S + +K KE K ER++E+ N+
Sbjct: 33 YQKLKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEKLKNNNR 78
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 228 GQQLSGFLGSDKSGRKVNKETETYSD 305
G Q G GS+++G N T+S+
Sbjct: 522 GSQAGGLAGSERTGTGTNAGKTTFSN 547
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 369 KSSQSKNYGRDEKYSEEKERSSTGKFGSND 458
++++ K + K + R ST ++GSND
Sbjct: 1845 ENAKGKKVAKYSKVGSYENRLSTWRYGSND 1874
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.0 bits (47), Expect = 7.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 98 LRRLKRILPEIKRKRKKLTQEILTERTKL 184
L+ + R L + ++ KKL QE+LT +L
Sbjct: 739 LQEMTRKLHQRQQHMKKLQQELLTNEQQL 767
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 300 SDKDAQTSESERTQSKDNGGLK 365
SD D+ +SES ++ D+G ++
Sbjct: 44 SDSDSSSSESSQSSDDDSGSVE 65
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 22.6 bits (46), Expect = 9.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 431 FHWEVWIE*LPSTFYKSRRGTCQEVTEETHSEQREKTRSDGVTKYTMVMSIS 586
+ W I+ L S FY +R + TEE E+R + +SD + +S
Sbjct: 288 YWWTSEIDRLRSHFYGMQRRFNRARTEEQR-EERRQIKSDARAALQQAIKLS 338
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 376 RNLRITEETRSTVKRRRGVPLGS 444
RNLR TEE + + P GS
Sbjct: 174 RNLRSTEEADDAKRAKNDAPSGS 196
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.313 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,186
Number of Sequences: 2352
Number of extensions: 8217
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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