Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0232.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.2  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   8.8  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 83  DQIHSLPHPPQSNRKTKEDI 24
           DQ H   H PQ+ R  ++DI
Sbjct: 227 DQQHGAQHRPQTTRPNRQDI 246


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 134 RSSDKVFRYSSDHRPDLDQIHSLPHPPQSNRKTKED 27
           R +DK  RY+ D   + D   +   P    + TK +
Sbjct: 117 RLNDKCNRYNDDEEDEEDDFINSQSPSNDQQPTKRE 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,939
Number of Sequences: 2352
Number of extensions: 9581
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)