Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0231.Seq
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022443-1|AAH22443.1|  192|Homo sapiens ZCCHC10 protein protein.      53   8e-07
BC005211-1|AAH05211.1|  170|Homo sapiens zinc finger, CCHC domai...    53   8e-07
AK000101-1|BAA90946.1|  170|Homo sapiens protein ( Homo sapiens ...    53   8e-07
AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein.     29   8.4  

>BC022443-1|AAH22443.1|  192|Homo sapiens ZCCHC10 protein protein.
          Length = 192

 Score = 52.8 bits (121), Expect = 8e-07
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 184 QGIRCQKCLEFGHWSYECKGKRK 252
           Q +RCQKCLEFGHW+YEC GKRK
Sbjct: 41  QHVRCQKCLEFGHWTYECTGKRK 63


>BC005211-1|AAH05211.1|  170|Homo sapiens zinc finger, CCHC domain
           containing 10 protein.
          Length = 170

 Score = 52.8 bits (121), Expect = 8e-07
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 184 QGIRCQKCLEFGHWSYECKGKRK 252
           Q +RCQKCLEFGHW+YEC GKRK
Sbjct: 19  QHVRCQKCLEFGHWTYECTGKRK 41


>AK000101-1|BAA90946.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20094 fis, clone COL04320. ).
          Length = 170

 Score = 52.8 bits (121), Expect = 8e-07
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 184 QGIRCQKCLEFGHWSYECKGKRK 252
           Q +RCQKCLEFGHW+YEC GKRK
Sbjct: 19  QHVRCQKCLEFGHWTYECTGKRK 41


>AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein.
          Length = 1778

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 541 YQRLTFSCLNRPDSEPLCSLNQTR 470
           + R TFSCL RP +EPL  L   R
Sbjct: 530 FLRETFSCLPRPRTEPLVDLESCR 553


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,486,469
Number of Sequences: 237096
Number of extensions: 1172345
Number of successful extensions: 2515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2515
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)