Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0230.Seq
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 77  FYIYVFIIFMPIYVFLIAEI 18
           ++ Y FII + +Y F  A I
Sbjct: 102 YFYYAFIILLCVYYFYYAFI 121


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 259 DCSRYYCCL 233
           DC +YY CL
Sbjct: 177 DCRKYYICL 185


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 259 DCSRYYCCL 233
           DC +YY CL
Sbjct: 177 DCRKYYICL 185


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 106 VINNSKL*IHFISMCSSYLCQFMY 35
           ++ +SKL    IS C S+  Q+ Y
Sbjct: 115 IVASSKLRASLISSCLSFFSQWGY 138


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 173  NSVNFKMFKHQLSSRNVHSY 232
            NS+ FK+  H+     +H Y
Sbjct: 1410 NSLTFKLKPHESDVEPIHGY 1429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,609
Number of Sequences: 336
Number of extensions: 2860
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)