Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0229.Seq
(419 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 1.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 1.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 1.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 2.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 2.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 2.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 3.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 3.2
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 4.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 4.3
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 9.9
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 9.9
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 388
+DEAE S+ G + QS I +VAR+ +T T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 307 ADAYFSLVCSETNVQSLSSSKLDRNS 230
+D+ +S CS + Q S S + RNS
Sbjct: 13 SDSGYSNTCSNSQSQRSSGSSISRNS 38
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 307 ADAYFSLVCSETNVQSLSSSKLDRNS 230
+D+ +S CS + Q S S + RNS
Sbjct: 13 SDSGYSNTCSNSQSQRSSGSSISRNS 38
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 281 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 376
++++E + SR Q R + + W++Q R+R+
Sbjct: 20 SEDSETGLRSRTQEERLRRRREWMIQQERERE 51
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 3.2
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 326 RHQYCQSWILQVARQRQTPQT 388
RH ++W+ R + TPQ+
Sbjct: 241 RHLERKAWVASFGRPKMTPQS 261
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 3.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 273 VSEQTRLKYASAPDGKVPVI 332
V EQT A D KVP+I
Sbjct: 230 VKEQTLQSIEMAKDAKVPII 249
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 223 KNKNFCPVLNLISFG 267
KNKN P +N+I G
Sbjct: 471 KNKNLTPAVNIIVKG 485
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 4.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 266 DISL*TDEAEVCICSRWQGPRHQYCQ 343
D+S E + CI + Q R QYC+
Sbjct: 141 DLSYACREEKSCIIDKRQRNRCQYCR 166
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 4.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 266 DISL*TDEAEVCICSRWQGPRHQYCQ 343
D+S E + CI + Q R QYC+
Sbjct: 141 DLSYACREEKSCIIDKRQRNRCQYCR 166
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 20.2 bits (40), Expect = 9.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 295 FSLVCSETNVQSLSSSKLDR 236
F ++CS ++ +L + LDR
Sbjct: 104 FDVMCSTASILNLCAISLDR 123
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +2
Query: 317 QGPRHQYCQSW 349
+GPR YC W
Sbjct: 567 KGPRTTYCAFW 577
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,081
Number of Sequences: 438
Number of extensions: 2436
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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