Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0228.Seq
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015943-1|AAH15943.1|  313|Homo sapiens DHRS1 protein protein.        29   7.1  
BC014057-1|AAH14057.1|  313|Homo sapiens DHRS1 protein protein.        29   7.1  
AK058159-1|BAB71694.1|  313|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AF418205-1|AAN32660.1|  313|Homo sapiens dehydrogenase/reductase...    29   7.1  

>BC015943-1|AAH15943.1|  313|Homo sapiens DHRS1 protein protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 466 LTHNSYSCLCIAIYLIHNKFWFKXAFP*FHIDN*CLCEHYFCAYFCRRSIVKVNSNLNIS 287
           L +N+Y+ +   +   +  FW   A     I+N  L  HYFC+ +  R +V     L + 
Sbjct: 89  LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVV 148

Query: 286 IITMVSLDHFW 254
           I +  SL + +
Sbjct: 149 ISSPGSLQYMF 159


>BC014057-1|AAH14057.1|  313|Homo sapiens DHRS1 protein protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 466 LTHNSYSCLCIAIYLIHNKFWFKXAFP*FHIDN*CLCEHYFCAYFCRRSIVKVNSNLNIS 287
           L +N+Y+ +   +   +  FW   A     I+N  L  HYFC+ +  R +V     L + 
Sbjct: 89  LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVV 148

Query: 286 IITMVSLDHFW 254
           I +  SL + +
Sbjct: 149 ISSPGSLQYMF 159


>AK058159-1|BAB71694.1|  313|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25430 fis, clone TST06262. ).
          Length = 313

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 466 LTHNSYSCLCIAIYLIHNKFWFKXAFP*FHIDN*CLCEHYFCAYFCRRSIVKVNSNLNIS 287
           L +N+Y+ +   +   +  FW   A     I+N  L  HYFC+ +  R +V     L + 
Sbjct: 89  LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVV 148

Query: 286 IITMVSLDHFW 254
           I +  SL + +
Sbjct: 149 ISSPGSLQYMF 159


>AF418205-1|AAN32660.1|  313|Homo sapiens dehydrogenase/reductase
           SDR family member 1 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 466 LTHNSYSCLCIAIYLIHNKFWFKXAFP*FHIDN*CLCEHYFCAYFCRRSIVKVNSNLNIS 287
           L +N+Y+ +   +   +  FW   A     I+N  L  HYFC+ +  R +V     L + 
Sbjct: 89  LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVV 148

Query: 286 IITMVSLDHFW 254
           I +  SL + +
Sbjct: 149 ISSPGSLQYMF 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,648,726
Number of Sequences: 237096
Number of extensions: 1070569
Number of successful extensions: 1605
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)