Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0228.Seq
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457741-13|CAM36354.1|  608|Caenorhabditis elegans Hypothetical...    29   2.6  
CU457741-11|CAM36352.1|  609|Caenorhabditis elegans Hypothetical...    29   2.6  
AF068201-1|AAC70927.1|  609|Caenorhabditis elegans aminopeptidas...    29   2.6  
AF068200-1|AAC72891.1|  609|Caenorhabditis elegans aminopeptidas...    29   2.6  

>CU457741-13|CAM36354.1|  608|Caenorhabditis elegans Hypothetical
           protein C42C1.11c protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 289 SIITMVSLDHFWLTASFMSLLRNCLHGE 206
           +++T  S +HFWL   F   L   +HG+
Sbjct: 305 NLVTNFSWEHFWLNEGFTVFLERKIHGK 332


>CU457741-11|CAM36352.1|  609|Caenorhabditis elegans Hypothetical
           protein C42C1.11a protein.
          Length = 609

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 289 SIITMVSLDHFWLTASFMSLLRNCLHGE 206
           +++T  S +HFWL   F   L   +HG+
Sbjct: 306 NLVTNFSWEHFWLNEGFTVFLERKIHGK 333


>AF068201-1|AAC70927.1|  609|Caenorhabditis elegans aminopeptidase-1
           protein.
          Length = 609

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 289 SIITMVSLDHFWLTASFMSLLRNCLHGE 206
           +++T  S +HFWL   F   L   +HG+
Sbjct: 306 NLVTNFSWEHFWLNEGFTVFLERKIHGK 333


>AF068200-1|AAC72891.1|  609|Caenorhabditis elegans aminopeptidase-1
           protein.
          Length = 609

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 289 SIITMVSLDHFWLTASFMSLLRNCLHGE 206
           +++T  S +HFWL   F   L   +HG+
Sbjct: 306 NLVTNFSWEHFWLNEGFTVFLERKIHGK 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,502,266
Number of Sequences: 27780
Number of extensions: 199761
Number of successful extensions: 425
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)