Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0227.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   3.8  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   6.6  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.6  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 319 EKSFTLIQGPLKVTVLDISFFCVVLV 242
           + SFTL Q  L VTV  +S   VV+V
Sbjct: 404 QSSFTLEQEELTVTVWTLSLPAVVIV 429


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 237 IHEL*SLIYQFNLIIHLTLFYP*GFICASLQYEING 130
           + E+  +  Q+N+ +H+  +    FIC   +Y + G
Sbjct: 261 LDEIGPVANQYNVWVHVDAYAGSAFICPEYRYLMKG 296


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 237 IHEL*SLIYQFNLIIHLTLFYP*GFICASLQYEING 130
           + E+  +  Q+N+ +H+  +    FIC   +Y + G
Sbjct: 292 LDEIGPVANQYNVWVHVDAYAGSAFICPEYRYLMKG 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,156
Number of Sequences: 2352
Number of extensions: 8648
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)