Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0225.Seq
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    68   2e-13
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.45 
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   7.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   9.7  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    23   9.7  

>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 68.1 bits (159), Expect = 2e-13
 Identities = 52/147 (35%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
 Frame = +2

Query: 89  PPALTD--KLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKNPRLKIRC 262
           PP+L D  KLRLY +   PY  RV L+L+AK+I Y    ++    PEW+  KNP  K+  
Sbjct: 13  PPSLPDDGKLRLYSMRFCPYAQRVHLMLDAKKIPYHAIYINLSEKPEWYLEKNPLGKVPA 72

Query: 263 WRFLRTRG-TGXXXXXXXXXITWMKKYTRHTLHSHDPYVKAQDRLLIERFNELIKGS--- 430
                  G T          I       +  L+  DP+ KAQDR+LIERF   + G    
Sbjct: 73  LEIPGKEGVTLYESLVLSDYIEEAYSAQQRKLYPADPFSKAQDRILIERFAGSVIGPYYR 132

Query: 431 -LECFDTNFAFGSEQIIQTLEIFEKEL 508
            L   D        +    L+IFEKEL
Sbjct: 133 ILFAADGIPPGAITEFGAGLDIFEKEL 159



 Score = 49.6 bits (113), Expect = 7e-08
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +1

Query: 517 GTNYFGGNRPGMLDYMVWPWVEK 585
           GT YFGG++PGM+DYM+WPW E+
Sbjct: 163 GTPYFGGDKPGMIDYMIWPWCER 185


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 67  RKRRCDSATGSDGQASSVPCRHEPVRSQGAPRPRSQE 177
           R+RRC      +  A++ P RH P R +   R +  +
Sbjct: 502 RRRRCRPRARRNPPATTRPVRHRPTRRKSTKRGKKDD 538


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 436 MLRHELRFRK*ADHPDAGDLREGIANXGTNYFGGNRPGM 552
           ++ H+ R+   A   DA   R G+A  G  +  G++P M
Sbjct: 135 LVHHDTRY---ASLEDAVQARNGVAVLGVLFHVGSQPNM 170


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 398  IERFNELIKGSLECFDTNFAFGSEQIIQ 481
            IE+F  L+K   E F+  FA+   +  Q
Sbjct: 1054 IEQFPSLVKKYFEDFEDGFAYNMTKFYQ 1081


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 402 SISNRSWALT*GSWEWSVCLVYF 334
           S SNRS+ L  G+ E+S+   YF
Sbjct: 184 SYSNRSFTLVPGTAEYSLPHAYF 206


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 110 LRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLD 205
           ++LY V   P    V + LEA  I YE   +D
Sbjct: 1   MKLYAVSDGPPSLAVRMALEALNIPYEHVSVD 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,157
Number of Sequences: 2352
Number of extensions: 10678
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)