Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0225.Seq
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 58 6e-09
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 43 2e-04
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 38 0.007
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 38 0.007
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 36 0.021
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 35 0.037
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 31 0.46
U55365-2|AAA98568.1| 184|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 29 3.2
U88311-3|AAB42345.1| 526|Caenorhabditis elegans Udp-glucuronosy... 27 7.5
Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +2
Query: 65 SVNAGVIPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKNP 244
+++ G I PP RLY + PY RVL+ L K I EV ++P R P W+ K+P
Sbjct: 84 TLHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSP 143
Query: 245 RLKIRCWRFLRTRGTGXXXXXXXXXITWMKK-YTRHTLHSHDPYVKAQDRLLIERFNELI 421
++ G + ++ + + +T+ D Y KA ++L+ER + ++
Sbjct: 144 IGRVPALEI-----NGKVVWESNVIVEYLDELFPTNTILPRDAYEKAHQKILVERLSPIM 198
Query: 422 KGSLECFDTN 451
E + ++
Sbjct: 199 NALFEFYGSS 208
Score = 33.5 bits (73), Expect = 0.11
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 526 YFGGNRPGMLDYMVWPWVEK 585
++GG +PG DY++WP++E+
Sbjct: 236 FYGGRQPGYADYLMWPFLER 255
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 65 SVNAGVIPPPALT-DKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKN 241
++ G +PPP+ + + R+Y + P R L+ K+I EV ++ + P+W+ KN
Sbjct: 11 ALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKN 70
Query: 242 PRLKIRCWRFLRTRGTGXXXXXXXXXITWMKKYTRHTLHSHDPYVKAQDRLLIERFNE 415
+ ++ + + + T+ + DPY K Q +LL+ER ++
Sbjct: 71 YKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETK--ILPSDPYEKVQQKLLLERLSD 126
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Frame = +1
Query: 265 EIPT---DQGDRFLFESVVICDYLDEEVHEAHAXXXXXXXXXXXXVA-DR---KIQRAHK 423
++PT D+G + + ES VI +YLD+ E + DR ++ A
Sbjct: 66 QVPTLEHDEGKKHVIESAVIPEYLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFY 125
Query: 424 RQPRMLRH-ELRFRK*ADHPDAGDLREGIANXGTNYFGGNRPGMLDYMVWPWVEKA 588
+ +++ +LR K AD A D E + G Y G ++PG +DY+++P +++A
Sbjct: 126 GVVQAVKNPDLREEKFADIKKAYDNAEQLLT-GDFYSGTSKPGFVDYLLYPNIQRA 180
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Frame = +1
Query: 265 EIPT---DQGDRFLFESVVICDYLDEEVHEAHAXXXXXXXXXXXXVA-DR---KIQRAHK 423
++PT D+G + + ES VI +YLD+ E + DR ++ A
Sbjct: 66 QVPTLEHDEGKKHVIESAVIPEYLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFY 125
Query: 424 RQPRMLRH-ELRFRK*ADHPDAGDLREGIANXGTNYFGGNRPGMLDYMVWPWVEKA 588
+ +++ +LR K AD A D E + G Y G ++PG +DY+++P +++A
Sbjct: 126 GVVQAVKNPDLREEKFADIKKAYDNAEQLLT-GDFYSGTSKPGFVDYLLYPNIQRA 180
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 71 NAGVIPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKN 241
N P P + +R+Y++ P+ R L+ K+I EV + + P+WF K+
Sbjct: 297 NGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWFFTKH 353
Score = 31.1 bits (67), Expect = 0.61
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +1
Query: 256 PVLEIPTDQGDRFLFESVVICDYLDEEVHEAHAXXXXXXXXXXXXVA-DR---KIQRAHK 423
P LE D+G + + ES VI +YLD+ E + DR ++ A
Sbjct: 359 PALE--HDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISGQLSSAFY 416
Query: 424 RQPRMLR-HELRFRK*ADHPDAGDLREGIANXGTNYFGGNRPGMLDYMVWPWVEKA 588
+ + +L K + A D E + G Y G ++PG +DY+++P +++A
Sbjct: 417 GVVQAAKISDLLKEKLVELAKAYDTAEELLT-GDFYSGTSKPGFVDYLIYPNIQRA 471
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 71 NAGVIPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKN 241
N P P + +R+Y++ P+ R L+ K+I EV + + P+WF K+
Sbjct: 14 NGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWFFTKH 70
Score = 31.1 bits (67), Expect = 0.61
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +1
Query: 256 PVLEIPTDQGDRFLFESVVICDYLDEEVHEAHAXXXXXXXXXXXXVA-DR---KIQRAHK 423
P LE D+G + + ES VI +YLD+ E + DR ++ A
Sbjct: 76 PALE--HDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISGQLSSAFY 133
Query: 424 RQPRMLR-HELRFRK*ADHPDAGDLREGIANXGTNYFGGNRPGMLDYMVWPWVEKA 588
+ + +L K + A D E + G Y G ++PG +DY+++P +++A
Sbjct: 134 GVVQAAKISDLLKEKLVELAKAYDTAEELLT-GDFYSGTSKPGFVDYLIYPNIQRA 188
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 65 SVNAGVIPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKN 241
++ G PP R+Y++ P+ R +L + AK I+ EV L+ EW+ K+
Sbjct: 10 AIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYWTKH 68
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 31.5 bits (68), Expect = 0.46
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 65 SVNAGVIPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRI 181
+++ G I PP RLY + PY RVL+ L K I
Sbjct: 84 TLHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
>U55365-2|AAA98568.1| 184|Caenorhabditis elegans Hypothetical
protein C12D5.4 protein.
Length = 184
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 449 NFAFGSEQIIQTLEIFEKELLTXVQITSAVTGLECWTTWSGLGSRRL 589
+F F + I+ ELLT + T + G++CW + G S R+
Sbjct: 49 SFLFSHQDIL--FLFISSELLTAIAATKSANGIQCWVSNEGTVSPRV 93
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 148 VTVRVHVDMVQTKLVRQSRWRNHTGVYGVKISHVFT*LLLYCT 20
V +R D + SRW N + K+ H F +L+ CT
Sbjct: 510 VVIRTFKDCIDAHRTGVSRWWNSIKAFPEKVLHKFCQILVLCT 552
>U88311-3|AAB42345.1| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein27 protein.
Length = 526
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 347 HTLHSHDPYVKAQDRLLIERFNELIKGSLECFDTNFAFGSEQIIQTLEIFEKELLTXVQI 526
H+ H D K +++ N E DT+FAFG + I + + + +LL ++
Sbjct: 310 HSSHMLDDAKKNLIKVIKSEPNVTFIWKYETNDTSFAFGIDNIYFSKWVPQSKLLNDARL 369
Query: 527 TSAVT 541
T+ +T
Sbjct: 370 TAFLT 374
>Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical
protein T03E6.3 protein.
Length = 342
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 232 CEEPQIEDPVLEIP-TDQGDRFLFESVVICDYLDEEVHE 345
CEE ++ + + + ++G+R L E ++IC+ D +H+
Sbjct: 293 CEESRLFETLESLEYIEKGERKLMEEMLICEINDLRIHD 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,552,539
Number of Sequences: 27780
Number of extensions: 258189
Number of successful extensions: 976
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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