Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0224.Seq
(569 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ... 63 4e-09
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ... 46 6e-04
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;... 42 0.013
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 39 0.072
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ... 39 0.072
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|... 36 0.67
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:... 33 3.6
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t... 33 4.7
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein P0459B... 33 6.2
UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal hy... 33 6.2
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p... 32 8.2
UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3; ... 32 8.2
>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
scapularis|Rep: Putative secreted protein - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 65
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = +3
Query: 51 PY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 209
P G+TANGS+ Q WFLRS+ TWITV ILELIHA+ AFIR + I
Sbjct: 2 PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54
>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
LRRG00114 - Rattus norvegicus (Rat)
Length = 223
Score = 46.0 bits (104), Expect = 6e-04
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2
Query: 430 LLPXLDVVAVSQAPSPESNPDSP 362
LLP LDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189
>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 508
Score = 41.5 bits (93), Expect = 0.013
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +2
Query: 116 YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 208
YLDNCGNSRANTC + D C Y KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 39.1 bits (87), Expect = 0.072
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -2
Query: 409 VAVSQAPSPESNPDSPLPVTTMVVAETTIES 317
+A+SQAPSPESN +SPLPV M+ I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402
>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 76
Score = 39.1 bits (87), Expect = 0.072
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = -2
Query: 568 WHQTCPPICSSLKYLKXTHSITRPRKSPVSYFLSLPPRAGSG*FARLLPXLDVVAVSQAP 389
WHQT P + ++ I ++ ++ L PP+ SG +RLL +D+VA+SQAP
Sbjct: 14 WHQTGPLL--GFGTVENRTPIHSTKRHQWNWSLP-PPKVSSGKVSRLLLPVDIVAISQAP 70
Query: 388 SP 383
SP
Sbjct: 71 SP 72
>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
tropicalis|Rep: Novel protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 118
Score = 35.9 bits (79), Expect = 0.67
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 302 MSALSTFDGSFCDYHG 349
MSALSTFDG+FC YHG
Sbjct: 1 MSALSTFDGTFCAYHG 16
>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
Mucin-16 - Homo sapiens (Human)
Length = 22152
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 484 VSYFLSLPPRAGSG*FARLLPXLDVVAVSQAPSPESNPDSPLPVTTMVVA 335
VS+ + P S F+ + P + + + SPES P SPLPVT ++ +
Sbjct: 5619 VSWMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3 - Rattus norvegicus
Length = 750
Score = 33.1 bits (72), Expect = 4.7
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 469 SLPPRAGSG*FARLLPXLDVVAVSQAPSPESNPDSPLP 356
++P G G A P L + A S PSPE PD+PLP
Sbjct: 608 AIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645
>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
protein - Roseovarius sp. HTCC2601
Length = 507
Score = 33.1 bits (72), Expect = 4.7
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 108 YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 227
YS T + VV+ EL+ T+ SD +A I + P+DG R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178
>UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein
P0459B01.16; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0459B01.16 - Oryza sativa subsp. japonica (Rice)
Length = 172
Score = 32.7 bits (71), Expect = 6.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 1 VVICLSQRLSHACLS 45
VVICLSQRLSHAC S
Sbjct: 156 VVICLSQRLSHACAS 170
>UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal
hydrolase 12; n=1; Schizosaccharomyces pombe|Rep:
Probable ubiquitin carboxyl-terminal hydrolase 12 -
Schizosaccharomyces pombe (Fission yeast)
Length = 979
Score = 32.7 bits (71), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 223 ASEVVNFDESGNFCRSHGQVPATHLSNVCLINFRW*F---LRLPWLSRVTGNQGSIPERE 393
+ E+++F E G + L C+IN W LRL +L + NQ S E++
Sbjct: 243 SKEIIDFLEKSKTLVELGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQSSNEEQK 302
Query: 394 PEKRLP 411
EKR+P
Sbjct: 303 QEKRVP 308
>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
protein sorting protein 36 (ELL-associated protein of 45
kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Vacuolar protein sorting protein
36 (ELL-associated protein of 45 kDa), partial -
Strongylocentrotus purpuratus
Length = 349
Score = 32.3 bits (70), Expect = 8.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 365 PVTRDNHGSRRNYHRKLIRQTFERCVA 285
PVTR+ HGS YH +L +Q E +A
Sbjct: 190 PVTRETHGSGLKYHEELAKQLSEALIA 216
>UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 775
Score = 32.3 bits (70), Expect = 8.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 169 PVMG*VLLLDQNQSTEGLASEVVNFDESGNFCRSHGQVP 285
P+M +L L Q+ T G AS V+ FD ++CR H +P
Sbjct: 85 PIMLGMLWLKQHDPTIGFASHVITFD--SDYCRRHCNMP 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,604,339
Number of Sequences: 1657284
Number of extensions: 11208676
Number of successful extensions: 25806
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25790
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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