Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0223.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 167 1e-41
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 167 1e-41
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 42 6e-04
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 42 6e-04
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 42 6e-04
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 42 6e-04
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 42 6e-04
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 40 0.002
L11451-1|AAA28918.1| 786|Drosophila melanogaster serine protein... 31 0.87
AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p pro... 31 0.87
AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA... 31 0.87
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 30 2.0
AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 28 6.1
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 8.1
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 8.1
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 8.1
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 8.1
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 167 bits (405), Expect = 1e-41
Identities = 73/79 (92%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 180
GKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQ
Sbjct: 2 GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
Query: 181 PNSAIRKCVRVQLIKNGKK 237
PNSAIRKCVRVQLIKNGKK
Sbjct: 62 PNSAIRKCVRVQLIKNGKK 80
Score = 103 bits (246), Expect = 2e-22
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +3
Query: 252 PRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLRSLQREKGRPRS 425
PRDG LN+IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL + +K RPRS
Sbjct: 86 PRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 167 bits (405), Expect = 1e-41
Identities = 73/79 (92%), Positives = 79/79 (100%)
Frame = +1
Query: 1 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 180
GKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQ
Sbjct: 2 GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
Query: 181 PNSAIRKCVRVQLIKNGKK 237
PNSAIRKCVRVQLIKNGKK
Sbjct: 62 PNSAIRKCVRVQLIKNGKK 80
Score = 103 bits (246), Expect = 2e-22
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +3
Query: 252 PRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLRSLQREKGRPRS 425
PRDG LN+IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL + +K RPRS
Sbjct: 86 PRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 237
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 237
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 237
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 237
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 104
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 237
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 88 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 216
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 84
>L11451-1|AAA28918.1| 786|Drosophila melanogaster serine proteinase
protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1
Query: 388 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGRMRSLSFRS 224
RR T T TT +RT PT RP ATS+SS S+ + P+ R S S S
Sbjct: 423 RRTTTPT-TTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSS 476
>AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p
protein.
Length = 683
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1
Query: 388 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGRMRSLSFRS 224
RR T T TT +RT PT RP ATS+SS S+ + P+ R S S S
Sbjct: 320 RRTTTPT-TTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSS 373
>AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA
protein.
Length = 787
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1
Query: 388 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGRMRSLSFRS 224
RR T T TT +RT PT RP ATS+SS S+ + P+ R S S S
Sbjct: 424 RRTTTPT-TTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSS 477
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 352 RTPGMSPTA*PLRPNPATSTSSFSSMW-FRQPSRGRMRSLS 233
+TP SPT P+ +P TS S S+ + PSR R RS S
Sbjct: 2256 KTPHTSPTRKPIIKSPYTSPSRKSAKSPYTSPSRNRQRSPS 2296
>AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA
protein.
Length = 358
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 115 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 225
PFG + +VLE+ G K Q IRKCV + +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 143 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 42
PF PP VP++A L L R +RRW
Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 143 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 42
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 143 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 42
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 143 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 42
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,973,568
Number of Sequences: 53049
Number of extensions: 497101
Number of successful extensions: 1640
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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