Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0222.Seq
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.59 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   7.3  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   7.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.3  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 350  DYVYLKMLK*GLVHVFLFY*IVLSCVLLIFKLKSISVFQI 231
            DY++L+ +    VH+F    I L+C  +++ +KS S+  I
Sbjct: 971  DYMFLRQVPIRRVHLFTM--IQLACFAVLWLIKSFSITSI 1008


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 457 ARKDW*VQ*NNFMIFYSWIIGCYRRDKCARTTRQLRNQFKLDL 585
           ARK W      F+++ + +       KC     Q  NQFK ++
Sbjct: 226 ARKAWLEYEELFLLYSATLKDLKLAKKCTEEKEQQYNQFKQEM 268


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 219 LNTHKNMYVLGESLFLSYLI 160
           +N+ +N+Y+LG S F   ++
Sbjct: 26  INSSRNLYILGVSFFFPLVL 45


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 525 IASDYP*IKYHKIILLXSPIFSCILSQ 445
           ++S +P ++Y   ++L S I  C+L Q
Sbjct: 839 VSSAFPTVRYQTAVVLASMIPICLLVQ 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,677
Number of Sequences: 2352
Number of extensions: 9375
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)