Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0220.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    50   3e-05
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    38   0.13 
UniRef50_A0HAB9 Cluster: Putative uncharacterized protein precur...    34   2.0  
UniRef50_Q3W7F4 Cluster: Similar to Uncharacterized conserved pr...    33   2.7  
UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1; Syn...    33   3.6  
UniRef50_A7RUI6 Cluster: Predicted protein; n=1; Nematostella ve...    33   4.7  
UniRef50_Q2H3B0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_O88573 Cluster: AF4/FMR2 family member 1; n=20; Mammali...    33   4.7  
UniRef50_A2E667 Cluster: Extensin-like region family protein; n=...    32   6.2  
UniRef50_A0WXU1 Cluster: Putative uncharacterized protein precur...    32   8.2  

>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +1

Query: 112 VILLSTRGTAVSDIWFMHSAERPVVRSYH 198
           VILLSTRGTA SD W +H AE+P+VRSYH
Sbjct: 661 VILLSTRGTADSDNWHLHLAEKPMVRSYH 689


>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 37.9 bits (84), Expect = 0.13
 Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -1

Query: 244 ARLASA----LEAFRHNPADGSFXXXXXXXXX*TKCPKLRFLSY 125
           AR+AS+    LEAF HNP  GSF          T C   RFLSY
Sbjct: 4   ARIASSPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSY 47


>UniRef50_A0HAB9 Cluster: Putative uncharacterized protein
           precursor; n=1; Comamonas testosteroni KF-1|Rep:
           Putative uncharacterized protein precursor - Comamonas
           testosteroni KF-1
          Length = 426

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = +2

Query: 44  AFCFECCPSSGLNF*ERHLHGGQ*YCSVREEPQFRTFGSCTRPSGRWCEATIRGIMPERL 223
           ++C+E C   G          GQ    + E P   T  S  +PSGRW  A + G+ P RL
Sbjct: 67  SYCYEPCNRPGATLDLEGSASGQ----LTETPM--TGASDPKPSGRWSLAALPGMAPPRL 120

Query: 224 *GRSQ 238
            GR Q
Sbjct: 121 QGRWQ 125


>UniRef50_Q3W7F4 Cluster: Similar to Uncharacterized conserved
           protein; n=4; Frankineae|Rep: Similar to Uncharacterized
           conserved protein - Frankia sp. EAN1pec
          Length = 645

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 28/83 (33%), Positives = 36/83 (43%)
 Frame = -2

Query: 393 KKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISCRIRLGWLRP*RRS 214
           ++TDS DLR P+G +  V R    T L K+      D+ G TV    RIR G + P   +
Sbjct: 111 EETDSTDLRQPHGGQAFVDRERQFTHLRKN-----DDTSGHTVDNGHRIRAGHIHPLTVT 165

Query: 213 GIIPRMVASHHRPLGRVHEPNVR 145
               R        L  VH P  R
Sbjct: 166 PGRLRFTGRPENALPWVHVPTAR 188


>UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1;
           Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
           protein - Syntrophus aciditrophicus (strain SB)
          Length = 90

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = -2

Query: 363 PNGLRRRVSRFECETRLVKS--HCLEPPDSRGSTVSI--SCRIR 244
           P+ ++R V  + CE+R+ +S  HCL  P SRG+ +     CR R
Sbjct: 31  PSYIKRGVPAYRCESRVGQSNFHCLNIPSSRGTEILCRKECRCR 74


>UniRef50_A7RUI6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 433

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 39  PKPSALNAALLQGLIFKSVTFMVVSNTAQYERNRSFGHLVHALGRAAGGAK 191
           PKP+++N  L     +K+  F        YE NR   + + +LG+   GAK
Sbjct: 67  PKPTSINELLCSSCGWKTEFFTSKKQAKSYEVNRRLVYSMRSLGKGHSGAK 117


>UniRef50_Q2H3B0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 640

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 109 SVILLSTRGTAVSDIWFMHSAERPV--VRSYHPRDYA*TPLRPKPA 240
           S +LL   GT +S    MHS+ERP+   +SY P     T  R  P+
Sbjct: 51  SAVLLPGEGTVMSVYMMMHSSERPIWTTKSYDPSSTGYTIQRTPPS 96


>UniRef50_O88573 Cluster: AF4/FMR2 family member 1; n=20;
           Mammalia|Rep: AF4/FMR2 family member 1 - Mus musculus
           (Mouse)
          Length = 1217

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +2

Query: 209 MPERL*GRSQPSRIRQDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 355
           +P+ L   S+P +     L+   ++   +K CD +SRV+  +R T+++S
Sbjct: 778 IPQPLGKGSRPRKAEDKQLSAGKKQDSETKSCDSSSRVTKKRRVTQKKS 826


>UniRef50_A2E667 Cluster: Extensin-like region family protein; n=8;
           Eukaryota|Rep: Extensin-like region family protein -
           Trichomonas vaginalis G3
          Length = 1444

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -1

Query: 463 TIPKPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWASTSRLAF*MRNATSKVTL-FRAS 287
           ++P PRH     P L   +  +        S  + + S + L   + NA S  TL F AS
Sbjct: 76  SLPTPRHNASSLPTLFHSNNSLPTPRHNSSSLPTLFHSNNSLPTLLFNANSLPTLIFNAS 135

Query: 286 RL-SGLHSEHILPDSARLASALEAFRHN 206
            L +  HS + LP     +S+L   RHN
Sbjct: 136 SLPTPRHSNNCLPTPRHNSSSLPTPRHN 163


>UniRef50_A0WXU1 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella pealeana ATCC 700345|Rep:
           Putative uncharacterized protein precursor - Shewanella
           pealeana ATCC 700345
          Length = 228

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 192 LPSAGLCLNASKAEA-SLAESGRICSLWSPESREALNNVTLLVAFRIQNARRDVEAHL 362
           L S+ L ++ SKAE+ S  E  ++ SL  PE ++A NNV      +   + RD+ A L
Sbjct: 116 LKSSDLVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQQAVASERDITAGL 173


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,236,459
Number of Sequences: 1657284
Number of extensions: 10210770
Number of successful extensions: 27682
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27677
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)