Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0220.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   1.4  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   3.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   5.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   5.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   5.8  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   7.6  
AF283273-1|AAG15375.1|   62|Anopheles gambiae phenylalanine hydr...    23   7.6  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 369 RDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISCR 250
           RD   L  + +R E    L+ S  L PP++ G     SC+
Sbjct: 26  RDAQNLVLQAAREEKADVLILSDVLRPPENNGRWAFSSCK 65


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 236 QPSRIRQDMLTVEPRESGGSK 298
           +P+R+RQD +  EP E    K
Sbjct: 123 RPARLRQDQIIFEPAEGTSYK 143


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 272 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 379
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 165 LGRAAGGAKLPSAGLCLNASKAEASLAESGRICSL 269
           LG     AKLP AG  +++S    + ++    C L
Sbjct: 58  LGGHRANAKLPGAGPIVSSSSGSGNSSKKYAYCGL 92


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144  FGHLVH-ALGRAAGGAKLPSAGLCLNASKA 230
            +  L+H A+G   GG  L   G CL   +A
Sbjct: 936  YSFLMHTAVGHGGGGQSLSGPGSCLEDFRA 965


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +2

Query: 116 YCSVREEPQFRTFGSCTRPSGR-----WCEATIRGIM 211
           YC   ++ +F  F S T P G+     W + + R I+
Sbjct: 395 YCGEEKDKEFLRFISSTAPDGKAKYQEWVQDSCRNIV 431


>AF283273-1|AAG15375.1|   62|Anopheles gambiae phenylalanine
           hydroxylase protein.
          Length = 62

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 243 AESGRICSLWSPESREA 293
           AE+  +C ++SPE  EA
Sbjct: 17  AEAKNVCLIFSPEQEEA 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,980
Number of Sequences: 2352
Number of extensions: 9968
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)