Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0219.Seq
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.25 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   3.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.2  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 311 KKSLFSVIKEITTERLQEDIYNIQDCSRKRMNPNITATYLRNHFQDNIILL 159
           K S  S  ++ TTE  +  +  IQD ++ R+N ++T TY +   +   ILL
Sbjct: 312 KPSSSSNQEKTTTESAKISV--IQDDAQMRLNKHVTTTYPKQPLRFGKILL 360


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 487 VFRYPIHSSLSFQYLLNLRNPKT 419
           V + PIH  ++F+Y  N+ N  T
Sbjct: 152 VTQCPIHPGMTFRYHFNVHNSGT 174


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +3

Query: 177 LEMISQIRSGNIWIHSFSAAVLDIVYVFL*SFSCDLFYDREQRFFN*RHTITKCFFVS 350
           +EM S ++  N  +   +A    I Y  +  FS    Y  +Q+  N RH++   FF+S
Sbjct: 329 IEMFS-LQIANEQVEFNAAGFFPINYTLV--FSVLKQYVMQQQVKNFRHSVRSVFFLS 383


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 490 YSYSKLRHSSFYLLAVHHRDKY 555
           Y + K    S ++  +HH +KY
Sbjct: 77  YDFPKDTFLSLFIYGMHHNEKY 98


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = -1

Query: 60  Y*C*CYFWMIIKI 22
           Y C C++W+++ +
Sbjct: 323 YLCFCFYWLLVMV 335


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = -1

Query: 60  Y*C*CYFWMIIKI 22
           Y C C++W+++ +
Sbjct: 279 YLCFCFYWLLVMV 291


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 154 LLDAKMGSGFRPFGK 110
           L DA +G GF P+ K
Sbjct: 55  LADAAVGKGFHPWKK 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,535
Number of Sequences: 336
Number of extensions: 3124
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)