Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0219.Seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   2.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.9  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.9  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.9  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.9  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.9  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   3.9  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   3.9  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   5.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.8  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 255 HIQYPGLQPKTNESKYYRYVFEKSFPGQHNFTPYYWMPKW 136
           H QYP     T+    Y      S+P + NF P+ + PK+
Sbjct: 161 HAQYPPYALATDIKPMYY----PSYPTEANFQPHPYYPKY 196


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 266 LQEDIYNIQDCSRKRMN 216
           L  D YNI  C R R+N
Sbjct: 53  LDSDSYNIYRCDRSRLN 69


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 107 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 139


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 107 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 139


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 107 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 139


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 107 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 139


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 125 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 157


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 364 SGNNPLFAKLLLNRCFSTPFWGCVSLGGIERIV 462
           SG   L      + C +  F+GCV +G  + IV
Sbjct: 125 SGTLSLQGSYPTDHCTNDAFYGCVRVGNRQHIV 157


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 294 GHKRDHN*KITRRHIQYPGLQPKTNESKY 208
           G   D     T++H++ PGL+ +   S Y
Sbjct: 255 GETEDRRPSDTQKHVELPGLEHEACNSVY 283


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 224  RMNPNITATYLRNHFQDNIILLRTIGCQNGFRFQTLRQG 108
            R+ P+I A + R H + N  L + +     FR    R G
Sbjct: 920  RVIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDDLCRMG 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,749
Number of Sequences: 2352
Number of extensions: 12933
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)