Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0218.Seq
         (584 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54P65 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q2HD10 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q8I2K7 Cluster: Putative uncharacterized protein PFI149...    32   8.7  

>UniRef50_Q54P65 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 757

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
 Frame = -3

Query: 531 YYYFLSLSNFGNSVLRKTVKKNVWLFVKKY*FWLFGLVKRIIVVILGRV-TPRAFIFVED 355
           YY+F  LS   NSVL      ++W++  +Y  ++           L +V T    +  + 
Sbjct: 160 YYFFTILSKVSNSVLINDDGFDIWIYSLEYPLFIIAKNGTGKTRFLKKVFTNSGILKCKQ 219

Query: 354 VLYVSSVNQRSVTSCVRT*VQKFFYEFLFIYYVFGVREVKNCPTFCLA-IWS 202
            +Y++     S ++ V     KFF EFL +Y    +    N   F    IW+
Sbjct: 220 SIYLNEFMVLSFSNGVNNEEVKFFEEFLNVYKAHSMLSTLNNKGFLTKYIWN 271


>UniRef50_Q2HD10 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1052

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -3

Query: 525 YFLSLSNFGNSVLRKTVKKNVWLFVKKY*FWLFGLVK 415
           + LS +   N +LRKTV+KN W+FV    F L+  +K
Sbjct: 813 HHLSGATILNKLLRKTVRKNTWIFVADTSFRLYVGIK 849


>UniRef50_Q8I2K7 Cluster: Putative uncharacterized protein PFI1495w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI1495w - Plasmodium falciparum
           (isolate 3D7)
          Length = 463

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 194 CSSDHIAKQKVGQFLTSLTPKT*YINKNS*KNFCTYVRTQEVTLLWLTELTYNTSSTKIN 373
           C+SDHI ++K G+ + S   +  Y N+N   N   Y    E       +  Y++++   N
Sbjct: 38  CTSDHIVEEKEGKHINSYNNENEYNNENEYNNKNEYNNKNEYNNKNNVKKNYSSNNNLYN 97

Query: 374 ARGVTRPKITTMIRLTK--PNSQNQY 445
             G    K+  +        N +N+Y
Sbjct: 98  YIGHINKKLINIDEYVNFINNKKNEY 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,371,416
Number of Sequences: 1657284
Number of extensions: 9540413
Number of successful extensions: 19252
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19247
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)