Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0216.Seq
(548 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 146 2e-35
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 146 2e-35
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 146 2e-35
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 146 2e-35
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 143 1e-34
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 0.59
AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p pro... 30 1.8
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 3.1
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 3.1
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 3.1
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 5.5
AE014134-504|AAF51184.1| 222|Drosophila melanogaster CG3083-PA ... 29 5.5
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 146 bits (354), Expect = 2e-35
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 34 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 213
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 214 ARVRKNTEARRKGR 255
RVRKNTEARRKGR
Sbjct: 66 YRVRKNTEARRKGR 79
Score = 142 bits (343), Expect = 4e-34
Identities = 68/101 (67%), Positives = 73/101 (72%)
Frame = +3
Query: 246 KGSHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 425
KG HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 77 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 136
Query: 426 FKNKRVLMEYIHRKKAEKARTKMLNRPGEARRN*VKEARKR 548
FKNKRVLMEYIH+KKAEK R+KML EARR V+EARKR
Sbjct: 137 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKR 177
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 146 bits (354), Expect = 2e-35
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 34 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 213
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 214 ARVRKNTEARRKGR 255
RVRKNTEARRKGR
Sbjct: 79 YRVRKNTEARRKGR 92
Score = 142 bits (343), Expect = 4e-34
Identities = 68/101 (67%), Positives = 73/101 (72%)
Frame = +3
Query: 246 KGSHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 425
KG HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 90 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 149
Query: 426 FKNKRVLMEYIHRKKAEKARTKMLNRPGEARRN*VKEARKR 548
FKNKRVLMEYIH+KKAEK R+KML EARR V+EARKR
Sbjct: 150 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKR 190
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 146 bits (354), Expect = 2e-35
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 34 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 213
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 214 ARVRKNTEARRKGR 255
RVRKNTEARRKGR
Sbjct: 61 YRVRKNTEARRKGR 74
Score = 142 bits (343), Expect = 4e-34
Identities = 68/101 (67%), Positives = 73/101 (72%)
Frame = +3
Query: 246 KGSHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 425
KG HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 426 FKNKRVLMEYIHRKKAEKARTKMLNRPGEARRN*VKEARKR 548
FKNKRVLMEYIH+KKAEK R+KML EARR V+EARKR
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKR 172
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 146 bits (354), Expect = 2e-35
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 34 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 213
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 214 ARVRKNTEARRKGR 255
RVRKNTEARRKGR
Sbjct: 61 YRVRKNTEARRKGR 74
Score = 142 bits (343), Expect = 4e-34
Identities = 68/101 (67%), Positives = 73/101 (72%)
Frame = +3
Query: 246 KGSHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 425
KG HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 426 FKNKRVLMEYIHRKKAEKARTKMLNRPGEARRN*VKEARKR 548
FKNKRVLMEYIH+KKAEK R+KML EARR V+EARKR
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKR 172
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 143 bits (347), Expect = 1e-34
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 34 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 213
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 214 ARVRKNTEARRKGR 255
RVRKNTEARRK R
Sbjct: 61 YRVRKNTEARRKDR 74
Score = 139 bits (336), Expect = 3e-33
Identities = 67/101 (66%), Positives = 72/101 (71%)
Frame = +3
Query: 246 KGSHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 425
K HCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 426 FKNKRVLMEYIHRKKAEKARTKMLNRPGEARRN*VKEARKR 548
FKNKRVLMEYIH+KKAEK R+KML EARR V+EARKR
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKR 172
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 454 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRALAV 281
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
>AY060882-1|AAL28430.1| 222|Drosophila melanogaster GM04269p
protein.
Length = 222
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 5 LCALDLT-VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 112
+C +L+ V+ +P +RG++P L CD VK GWI+
Sbjct: 47 VCTTELSRVAALIPEFQKRGVKPIALSCDTVKSHKGWIE 85
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 121 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRTVALVREEVQPMRVC 300
N++ TNSR IK GLV++ ++HS+ R+ ++ A + + + P
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRLINFSDGSPYETLHAFISKSLAPYFKS 163
Query: 301 HRRNYGYKDK 330
+ + G D+
Sbjct: 164 YVKESGRADR 173
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 121 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRTVALVREEVQPMRVC 300
N++ TNSR IK GLV++ ++HS+ R+ ++ A + + + P
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRLINFSDGSPYETLHAFISKSLAPYFKS 163
Query: 301 HRRNYGYKDK 330
+ + G D+
Sbjct: 164 YVKESGRADR 173
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 121 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRTVALVREEVQPMRVC 300
N++ TNSR IK GLV++ ++HS+ R+ ++ A + + + P
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRLINFSDGSPYETLHAFISKSLAPYFKS 163
Query: 301 HRRNYGYKDK 330
+ + G D+
Sbjct: 164 YVKESGRADR 173
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 121 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 222
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014134-504|AAF51184.1| 222|Drosophila melanogaster CG3083-PA
protein.
Length = 222
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 5 LCALDLT-VSG*VPSSCRRGLQP--LLCDVVKRRCGWIQ 112
+C +L+ V+ +P +RG++P L CD V+ GWI+
Sbjct: 47 VCTTELSRVAALIPEFQKRGVKPIALSCDTVESHKGWIE 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,442,543
Number of Sequences: 53049
Number of extensions: 564167
Number of successful extensions: 1612
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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