Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0214.Seq
(429 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 126 2e-28
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 107 7e-23
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 104 9e-22
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 99 2e-20
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 91 9e-18
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 85 4e-16
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 85 6e-16
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 83 2e-15
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 78 7e-14
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 65 5e-10
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 60 3e-08
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 58 6e-08
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 57 1e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 52 4e-06
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 52 7e-06
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 49 4e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 48 8e-05
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 47 1e-04
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 45 8e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 44 0.002
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 43 0.003
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 40 0.022
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 39 0.038
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 39 0.051
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.067
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.12
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 37 0.20
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 0.47
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 36 0.47
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 2.5
UniRef50_A1WKM4 Cluster: Beta-ketoacyl synthase; n=4; cellular o... 33 3.3
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 33 3.3
UniRef50_Q47DI4 Cluster: Helix-turn-helix, Fis-type; n=1; Dechlo... 32 4.4
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 32 5.8
UniRef50_Q0AXV2 Cluster: ATP-dependent nuclease subunit B; n=1; ... 31 7.7
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 7.7
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 31 7.7
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 126 bits (304), Expect = 2e-28
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 78.2 bits (184), Expect = 7e-14
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 107 bits (258), Expect = 7e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 104 bits (249), Expect = 9e-22
Identities = 45/64 (70%), Positives = 57/64 (89%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 33.9 bits (74), Expect = 1.4
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 260 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGY 397
++VPE SALE + I VD +T +ML L ++ G++ Q + Y
Sbjct: 83 DFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 99 bits (238), Expect = 2e-20
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEE
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEE 131
Query: 243 ERER 254
ERER
Sbjct: 132 ERER 135
Score = 55.2 bits (127), Expect = 5e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 137 DNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 91.1 bits (216), Expect = 9e-18
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEE
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEE 116
Query: 243 ERER 254
ERER
Sbjct: 117 ERER 120
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 85.4 bits (202), Expect = 4e-16
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
+EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEE
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 85.0 bits (201), Expect = 6e-16
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEE
Sbjct: 18 IEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEE 76
Query: 243 ERE 251
ERE
Sbjct: 77 ERE 79
Score = 62.9 bits (146), Expect = 3e-09
Identities = 24/44 (54%), Positives = 37/44 (84%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 388
DNYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 82 DNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 83.0 bits (196), Expect = 2e-15
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 243 ER 248
ER
Sbjct: 114 ER 115
Score = 58.4 bits (135), Expect = 6e-08
Identities = 24/40 (60%), Positives = 34/40 (85%)
Frame = +2
Query: 260 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
+Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 118 DYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 78.2 bits (184), Expect = 7e-14
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +3
Query: 66 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 245
++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+E
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Query: 246 RER 254
RER
Sbjct: 132 RER 134
Score = 60.5 bits (140), Expect = 1e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPE+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 136 DNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 65.3 bits (152), Expect = 5e-10
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
+ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 124 ETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + +E
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVARGGERKKET 125
Query: 243 ERERVTTMSQKCL 281
V+ + Q+ +
Sbjct: 126 YVPEVSALDQEII 138
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 200
I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 58.4 bits (135), Expect = 6e-08
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3
Query: 69 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 191
KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIK 59
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +3
Query: 66 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 245
EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEE
Sbjct: 18 EKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEE 77
Query: 246 RER 254
RER
Sbjct: 78 RER 80
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +2
Query: 272 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 218
+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 17 VEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 51.6 bits (118), Expect = 7e-06
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 66 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR--HSQVRGISIKLQE 239
EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R SQV S + +
Sbjct: 18 EKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQVSPSSCRRRR 77
Query: 240 EER 248
+R
Sbjct: 78 RDR 80
Score = 39.9 bits (89), Expect = 0.022
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 260 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 358
NYVPE S L+ +I EVD TK+MLK+ F +++
Sbjct: 82 NYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 194
+E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 17 VEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 48.0 bits (109), Expect = 8e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 188
IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 47.2 bits (107), Expect = 1e-04
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
+E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q
Sbjct: 17 VEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHA 76
Query: 243 ERERVTTMSQK 275
E R Q+
Sbjct: 77 EEFRAALFQQQ 87
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 44.8 bits (101), Expect = 8e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 171 FATHLMRRLRHSQVRGISIKLQEEERER 254
F HLMRR++ VRGIS+KLQEEERER
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERER 93
Score = 31.9 bits (69), Expect = 5.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 260 NYVPEVSALEHDIIEVDPDTKDMLKMLDFN 349
++VPE S ++ +I+VD DT DML L N
Sbjct: 96 DFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 93 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 182
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 66 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEE 242
EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L E
Sbjct: 35 EKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSLAAE 93
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 188
+EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 17 LEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 39.9 bits (89), Expect = 0.022
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 200
IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 17 IENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 39.1 bits (87), Expect = 0.038
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 194
++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 17 LKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.7 bits (86), Expect = 0.051
Identities = 15/44 (34%), Positives = 31/44 (70%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 194
+E + ++ DF NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 12 LETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 38.3 bits (85), Expect = 0.067
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 188
+E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 16 MERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.12
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -3
Query: 181 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRTRP 17
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFTYVGLTVP 71
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 36.7 bits (81), Expect = 0.20
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 188
+ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 17 LRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 0.47
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 69 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 182
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.5 bits (78), Expect = 0.47
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 179
+E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 16 LEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 93 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 182
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A1WKM4 Cluster: Beta-ketoacyl synthase; n=4; cellular
organisms|Rep: Beta-ketoacyl synthase - Verminephrobacter
eiseniae (strain EF01-2)
Length = 3275
Score = 32.7 bits (71), Expect = 3.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 323 PWCRGL---LR*CHVREQTLLGHSCHPLTLLFLKFD 225
PWCR + L C R LLG +C PL L+F D
Sbjct: 2620 PWCRTIASYLETCTARHGALLGGTCSPLELMFADGD 2655
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/60 (23%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 66 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS-QVRGISIKLQEE 242
+K+ + + +D NK++ +E + +K ++N+IAG+ T ++ ++ + + S +L+E+
Sbjct: 18 DKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVEAQEASEELEED 77
>UniRef50_Q47DI4 Cluster: Helix-turn-helix, Fis-type; n=1;
Dechloromonas aromatica RCB|Rep: Helix-turn-helix,
Fis-type - Dechloromonas aromatica (strain RCB)
Length = 335
Score = 32.3 bits (70), Expect = 4.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 135 IPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERVTT 263
+P ++N + G + L +R R+ Q GIS+ L +E RVTT
Sbjct: 8 VPIDFIKNLLGGLSLSLEQRARYMQQIGISMDLLDEGSARVTT 50
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.9 bits (69), Expect = 5.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 194
+ Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 31 LSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_Q0AXV2 Cluster: ATP-dependent nuclease subunit B; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent nuclease subunit B - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 1124
Score = 31.5 bits (68), Expect = 7.7
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 170 ICHTFNEASQTLASARNLYQTSGRGA*EGDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 349
IC T + + +A +L+Q GR + V + +AL+ +II+VDP +MLK + N
Sbjct: 226 ICFTLDPDTWDIAEL-DLFQLPGRSFRQIRAMVRK-NALQEEIIQVDPRPAEMLKSPEIN 283
Query: 350 NINGLQLTQP 379
++ P
Sbjct: 284 HLEAELFAYP 293
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 7.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 254 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 126
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 31.5 bits (68), Expect = 7.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 182
++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 63 LKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,117,691
Number of Sequences: 1657284
Number of extensions: 7163338
Number of successful extensions: 17779
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 17431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17776
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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