Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0214.Seq
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   127   2e-31
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   3.5  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   4.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  127 bits (306), Expect = 2e-31
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = +3

Query: 63  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 243 ERER 254
           ERER
Sbjct: 77  ERER 80



 Score = 74.5 bits (175), Expect = 1e-15
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +2

Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
           DNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P T  GY  RRN
Sbjct: 82  DNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP-TAPGYSNRRN 131


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 293 DIIEVDPDTKDMLKMLDFNNINGL 364
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 189 RRLRHSQVRGISIKLQEEERERVTTMSQKCLLSNMTSSK*TPT 317
           RR     +  ISI  +EEERE +   + +   +N  S+  T T
Sbjct: 599 RRSHRPSLHDISIIDEEEEREDIEGTADEDTAANTLSNAQTAT 641


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,838
Number of Sequences: 2352
Number of extensions: 7837
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)