Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0214.Seq
(429 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 107 1e-23
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 107 1e-23
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 107 1e-23
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 107 1e-23
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 91 2e-18
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 107 bits (258), Expect = 1e-23
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 90.6 bits (215), Expect = 2e-18
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +3
Query: 63 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++++ VRGISIKLQEE
Sbjct: 17 IEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEE 76
Query: 243 ERER 254
RER
Sbjct: 77 VRER 80
Score = 70.1 bits (164), Expect = 3e-12
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 379
DNYVPE+SAL+ +IIEVDPDTK+MLK+LDF ++ LQ+TQP
Sbjct: 82 DNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,695,632
Number of Sequences: 237096
Number of extensions: 1038399
Number of successful extensions: 1951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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