Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0214.Seq
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   126   1e-29
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   126   1e-29
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   126   1e-29
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   126   1e-29
AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p pro...    28   6.1  
AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-P...    28   6.1  
AF142061-1|AAD48407.1| 1207|Drosophila melanogaster protein kina...    27   8.1  
AE014296-1893|AAF50105.1| 1207|Drosophila melanogaster CG6297-PB...    27   8.1  
AE014296-1892|AAN11898.1| 1207|Drosophila melanogaster CG6297-PA...    27   8.1  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  126 bits (304), Expect = 1e-29
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = +3

Query: 63  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 243 ERER 254
           ERER
Sbjct: 77  ERER 80



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +2

Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
           DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  126 bits (304), Expect = 1e-29
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = +3

Query: 63  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 243 ERER 254
           ERER
Sbjct: 77  ERER 80



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +2

Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
           DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  126 bits (304), Expect = 1e-29
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = +3

Query: 63  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 243 ERER 254
           ERER
Sbjct: 77  ERER 80



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +2

Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
           DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  126 bits (304), Expect = 1e-29
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = +3

Query: 63  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 243 ERER 254
           ERER
Sbjct: 77  ERER 80



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +2

Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
           DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p
           protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 260 CHPLTLLFLKFDRDSSHLRV 201
           CH LT LFL+FD D+  L++
Sbjct: 257 CHKLTRLFLRFDCDTLSLKL 276


>AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-PA
           protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 260 CHPLTLLFLKFDRDSSHLRV 201
           CH LT LFL+FD D+  L++
Sbjct: 257 CHKLTRLFLRFDCDTLSLKL 276


>AF142061-1|AAD48407.1| 1207|Drosophila melanogaster protein kinase
            JIL-1 protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 66   EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 245
            E+YY+ L L  +  + I    A+IP +P         T   RR     V+ +S+   E+ 
Sbjct: 1003 EEYYSELPLPEEDRQYIPPPPALIPVEP-ETTFRRPRTRQQRRTESQLVQPVSVATYEDS 1061

Query: 246  RERVTTMSQK 275
            +  +  + Q+
Sbjct: 1062 KASLRVLMQQ 1071


>AE014296-1893|AAF50105.1| 1207|Drosophila melanogaster CG6297-PB,
            isoform B protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 66   EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 245
            E+YY+ L L  +  + I    A+IP +P         T   RR     V+ +S+   E+ 
Sbjct: 1003 EEYYSELPLPEEDRQYIPPPPALIPVEP-ETTFRRPRTRQQRRTESQLVQPVSVATYEDS 1061

Query: 246  RERVTTMSQK 275
            +  +  + Q+
Sbjct: 1062 KASLRVLMQQ 1071


>AE014296-1892|AAN11898.1| 1207|Drosophila melanogaster CG6297-PA,
            isoform A protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 66   EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 245
            E+YY+ L L  +  + I    A+IP +P         T   RR     V+ +S+   E+ 
Sbjct: 1003 EEYYSELPLPEEDRQYIPPPPALIPVEP-ETTFRRPRTRQQRRTESQLVQPVSVATYEDS 1061

Query: 246  RERVTTMSQK 275
            +  +  + Q+
Sbjct: 1062 KASLRVLMQQ 1071


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,707,888
Number of Sequences: 53049
Number of extensions: 326512
Number of successful extensions: 925
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)