Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0210.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071384-1|AAL49006.1|  115|Drosophila melanogaster RE42326p pro...    81   6e-16
AE014298-1953|AAF48311.1|  115|Drosophila melanogaster CG11151-P...    81   6e-16
AY089539-1|AAL90277.1|  544|Drosophila melanogaster LD10783p pro...    46   3e-05
AE014134-2983|AAF53713.1|  544|Drosophila melanogaster CG17320-P...    46   3e-05
X97685-1|CAA66277.1|  543|Drosophila melanogaster sterol carrier...    44   9e-05
AY047508-1|AAK77240.1|  412|Drosophila melanogaster GH01709p pro...    36   0.023
AE014297-4159|AAF56735.1|  412|Drosophila melanogaster CG5590-PA...    36   0.023

>AY071384-1|AAL49006.1|  115|Drosophila melanogaster RE42326p
           protein.
          Length = 115

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 40/58 (68%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -1

Query: 427 PKSG-KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLGPLLKSDAK 257
           P  G K DTT  +AD D+V IA G LNPQ A+MKGKL IAGNIML QKL PLLK+DAK
Sbjct: 57  PAQGIKVDTTLTVADEDMVDIALGKLNPQAAFMKGKLKIAGNIMLTQKLAPLLKTDAK 114


>AE014298-1953|AAF48311.1|  115|Drosophila melanogaster CG11151-PA
           protein.
          Length = 115

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 40/58 (68%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -1

Query: 427 PKSG-KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLGPLLKSDAK 257
           P  G K DTT  +AD D+V IA G LNPQ A+MKGKL IAGNIML QKL PLLK+DAK
Sbjct: 57  PAQGIKVDTTLTVADEDMVDIALGKLNPQAAFMKGKLKIAGNIMLTQKLAPLLKTDAK 114


>AY089539-1|AAL90277.1|  544|Drosophila melanogaster LD10783p
           protein.
          Length = 544

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 32/50 (64%)
 Frame = -1

Query: 415 KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLGPLLKS 266
           K D T+ I+D D+ ++ +G L PQ A+ +GK+ I GN+  A KL  L +S
Sbjct: 483 KCDVTFIISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRS 532


>AE014134-2983|AAF53713.1|  544|Drosophila melanogaster CG17320-PA
           protein.
          Length = 544

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 32/50 (64%)
 Frame = -1

Query: 415 KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLGPLLKS 266
           K D T+ I+D D+ ++ +G L PQ A+ +GK+ I GN+  A KL  L +S
Sbjct: 483 KCDVTFIISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRS 532


>X97685-1|CAA66277.1|  543|Drosophila melanogaster sterol carrier
           protein x protein.
          Length = 543

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = -1

Query: 415 KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKL 284
           K D T+ I+D D+ ++ +G L PQ A+ +GK+ I GN+  A KL
Sbjct: 483 KCDVTFIISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKL 526


>AY047508-1|AAK77240.1|  412|Drosophila melanogaster GH01709p
           protein.
          Length = 412

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = -1

Query: 469 MDTRPQVPSCSRRRPKSGKADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQ 290
           +D +    SC    P +   D T  +   +   + SG L    AYM GKL I+G+   A 
Sbjct: 341 LDLKNGSGSCGAGTPTAAP-DATLTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKAL 399

Query: 289 KLGPLLKS 266
           KL  L+K+
Sbjct: 400 KLEKLMKA 407


>AE014297-4159|AAF56735.1|  412|Drosophila melanogaster CG5590-PA
           protein.
          Length = 412

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = -1

Query: 469 MDTRPQVPSCSRRRPKSGKADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQ 290
           +D +    SC    P +   D T  +   +   + SG L    AYM GKL I+G+   A 
Sbjct: 341 LDLKNGSGSCGAGTPTAAP-DATLTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKAL 399

Query: 289 KLGPLLKS 266
           KL  L+K+
Sbjct: 400 KLEKLMKA 407


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,032,062
Number of Sequences: 53049
Number of extensions: 341417
Number of successful extensions: 595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)