Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0210.Seq
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41544-2|AAA83184.1|  436|Caenorhabditis elegans Dehydrogenases,...    60   9e-10
Z48638-10|CAA88566.1|  118|Caenorhabditis elegans Hypothetical p...    42   2e-04
U10402-1|AAK67218.1|  232|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z82072-1|CAB04920.2|  467|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL032636-6|CAB54421.1|  467|Caenorhabditis elegans Hypothetical ...    27   10.0 

>U41544-2|AAA83184.1|  436|Caenorhabditis elegans Dehydrogenases,
           short chain protein28 protein.
          Length = 436

 Score = 60.1 bits (139), Expect = 9e-10
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = -1

Query: 469 MDTRPQVPSCSRRRPKSG-KADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLA 293
           +D +   PS      K+G KA+ T  +AD+D V IA+G LN Q A+M GKL + GN+ML 
Sbjct: 362 LDFKSASPSVYLGDVKNGEKANATVTVADSDFVDIAAGKLNAQKAFMSGKLKVKGNVMLL 421

Query: 292 QKLGPLLKSDAK 257
           QKL  +L+   K
Sbjct: 422 QKLQTVLEKAKK 433


>Z48638-10|CAA88566.1|  118|Caenorhabditis elegans Hypothetical
           protein ZK892.2 protein.
          Length = 118

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = -1

Query: 394 IADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLGPLL 272
           I D+D + IA+G + P  A+M+GK+ + GNI  A KL  +L
Sbjct: 69  IKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKLRTIL 109


>U10402-1|AAK67218.1|  232|Caenorhabditis elegans Hypothetical
           protein C34E10.10 protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -1

Query: 433 RRPKSGKADTTYAIADADLVQIASGALNPQVAYMKGKLXIAGNIMLAQKLG 281
           RR  SGK     A  D +L +     +   + Y+K K  +  NI  A K G
Sbjct: 108 RRAASGKTKYLIATQDDELTEKLRAIVGTPIMYIKFKTVLLDNISEATKAG 158


>AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical
           protein Y47H9B.2 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 366 HLELSILKLHT*KENLXSQATSCSPKSLDLCSNQMLN 256
           HLE+ + KL    E   SQ  +CSPK ++     +LN
Sbjct: 102 HLEVPVNKLSDVIEPCLSQKENCSPKVMNFARAYILN 138


>Z82072-1|CAB04920.2|  467|Caenorhabditis elegans Hypothetical
           protein W05H12.1 protein.
          Length = 467

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 177 KIKWKLLFSVIRMLLNKADMKRYINCDKCYFFYCTGKF 64
           K KW+L  S+I   + +  +   + C  C    C G F
Sbjct: 3   KTKWRLNQSIILFFIAQFSVSAAVKCFDCVGMDCMGSF 40


>AL032636-6|CAB54421.1|  467|Caenorhabditis elegans Hypothetical
           protein W05H12.1 protein.
          Length = 467

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 177 KIKWKLLFSVIRMLLNKADMKRYINCDKCYFFYCTGKF 64
           K KW+L  S+I   + +  +   + C  C    C G F
Sbjct: 3   KTKWRLNQSIILFFIAQFSVSAAVKCFDCVGMDCMGSF 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,130,950
Number of Sequences: 27780
Number of extensions: 188447
Number of successful extensions: 396
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)