Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0209.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.58 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.4  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -3

Query: 309 FCGTKRVPKVYNEYVGKY*EKFISQGRIFMANYIEYNICDFGLNL 175
           F   ++  K Y    G+  EK    G +F     EY  CD   N+
Sbjct: 46  FADAEQCDKYYECNDGQITEKLCPDGMVFNDYSSEYEKCDLPFNI 90


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 136 LKNINYFSFIY*IVYL*NRVYIIYI 62
           L+N++   F+Y I+Y+   V++ Y+
Sbjct: 132 LRNVSVQFFVYVILYILATVFLAYV 156


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 136 LKNINYFSFIY*IVYL*NRVYIIYI 62
           L+N++   F+Y I+Y+   V++ Y+
Sbjct: 132 LRNVSVQFFVYVILYILATVFLAYV 156


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 125  KLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVIY 15
            K+ F YL+    V +S   IH I+  E E   +  ++
Sbjct: 1026 KIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMF 1062


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 125 KLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVIY 15
           K+ F YL+    V +S   IH I+  E E   +  ++
Sbjct: 307 KIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMF 343


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 306 CGTKRVPKVYNEYVGKY*EKFISQGRIFMANYIE 205
           C  K +  ++NE+ G      I    + + NYI+
Sbjct: 199 CSIKELNMIFNEFFGWPIIMIILYSSLMVLNYID 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,419
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)