Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0209.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069610-1|AAL39755.1|  441|Drosophila melanogaster LD37137p pro...    30   2.4  
AE013599-2740|AAF57656.2|  441|Drosophila melanogaster CG5469-PD...    30   2.4  
AE013599-2739|AAM68442.1|  441|Drosophila melanogaster CG5469-PC...    30   2.4  
AE013599-2738|AAF57657.2|  441|Drosophila melanogaster CG5469-PB...    30   2.4  

>AY069610-1|AAL39755.1|  441|Drosophila melanogaster LD37137p
           protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -1

Query: 170 LNKLLEMILNKPEKYKLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVI 18
           L + LE ++  PE+ K   I + N +F ++  Y   ++ +L++  F+E  I
Sbjct: 190 LIRYLENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQI 240


>AE013599-2740|AAF57656.2|  441|Drosophila melanogaster CG5469-PD,
           isoform D protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -1

Query: 170 LNKLLEMILNKPEKYKLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVI 18
           L + LE ++  PE+ K   I + N +F ++  Y   ++ +L++  F+E  I
Sbjct: 190 LIRYLENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQI 240


>AE013599-2739|AAM68442.1|  441|Drosophila melanogaster CG5469-PC,
           isoform C protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -1

Query: 170 LNKLLEMILNKPEKYKLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVI 18
           L + LE ++  PE+ K   I + N +F ++  Y   ++ +L++  F+E  I
Sbjct: 190 LIRYLENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQI 240


>AE013599-2738|AAF57657.2|  441|Drosophila melanogaster CG5469-PB,
           isoform B protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -1

Query: 170 LNKLLEMILNKPEKYKLLFIYLLNSVFVKQSLYYIHSIQILESESFSEFVI 18
           L + LE ++  PE+ K   I + N +F ++  Y   ++ +L++  F+E  I
Sbjct: 190 LIRYLENLIKNPEEEKFCKIRMSNKIFSEKVRYVEGALDVLQAAGFNEVQI 240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,452,894
Number of Sequences: 53049
Number of extensions: 393133
Number of successful extensions: 774
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)