Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0209.Seq
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077536-3|ABS19474.1|  510|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF077536-2|AAK31410.2|  527|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical pr...    27   8.9  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   8.9  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF000194-2|AAK39380.1|  202|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AF077536-3|ABS19474.1|  510|Caenorhabditis elegans Hypothetical
           protein C16A11.4b protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = -1

Query: 314 SDSVALNEFLKFITSMSENIKKSLS-------RKEEFLWPTT*NIISVTLD*I*HLNKLL 156
           + SV L EFL+F++  SENI + L+        KE   +P +  I+   L+     + LL
Sbjct: 109 NQSVNLEEFLEFLSEASENISRPLALTTLFEDYKEHINYPQSVRILRKQLE-----SNLL 163

Query: 155 EMILNKPEKY 126
           E I   P  Y
Sbjct: 164 ETISMSPNYY 173


>AF077536-2|AAK31410.2|  527|Caenorhabditis elegans Hypothetical
           protein C16A11.4a protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = -1

Query: 314 SDSVALNEFLKFITSMSENIKKSLS-------RKEEFLWPTT*NIISVTLD*I*HLNKLL 156
           + SV L EFL+F++  SENI + L+        KE   +P +  I+   L+     + LL
Sbjct: 109 NQSVNLEEFLEFLSEASENISRPLALTTLFEDYKEHINYPQSVRILRKQLE-----SNLL 163

Query: 155 EMILNKPEKY 126
           E I   P  Y
Sbjct: 164 ETISMSPNYY 173


>Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical
           protein C17E4.2 protein.
          Length = 819

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -1

Query: 365 VEDSNPR---YKIGSRLFSISDSVALNEFLKFITSMSENIKKSLSRKEEF 225
           V+  NP+   Y+  S    ++   A NEFLK       NI +S+  KE+F
Sbjct: 149 VDSMNPKISVYENSSNTLELTQLKAENEFLKHELVEQRNIFESMLGKEKF 198


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -1

Query: 449 CEYGAATFTAVFPSICDLDLSKAEVFTYVEDSNPRYKIGSRLFSISDSVALNEFLKFITS 270
           C+    +F  + PS+C  DL    + T+V+D+  +Y       S     AL E  + + S
Sbjct: 361 CKVKTLSFDPLDPSVCGCDLFGKLLPTFVQDAVKKY-------SDDKDQALREIKECVRS 413

Query: 269 MSENIKKSLSRKE 231
             E++   L   E
Sbjct: 414 YDEHLNYQLQLAE 426


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -1

Query: 449 CEYGAATFTAVFPSICDLDLSKAEVFTYVEDSNPRYKIGSRLFSISDSVALNEFLKFITS 270
           C+    +F  + PS+C  DL    + T+V+D+  +Y       S     AL E  + + S
Sbjct: 381 CKVKTLSFDPLDPSVCGCDLFGKLLPTFVQDAVKKY-------SDDKDQALREIKECVRS 433

Query: 269 MSENIKKSLSRKE 231
             E++   L   E
Sbjct: 434 YDEHLNYQLQLAE 446


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
            protein M01E10.2 protein.
          Length = 1286

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -1

Query: 428  FTAVFPSICDLDLSKAEVFTYVEDSNPRYKIGSRLFSISDSVALNEFLKFITSMS 264
            F  V P  C  DL+     TY +DS   +   S +F++ D+    E LKF+  +S
Sbjct: 1091 FAFVDPRGCSSDLALLTDLTYADDSLTAW-AASHVFNVHDA----ESLKFVCKLS 1140


>AF000194-2|AAK39380.1|  202|Caenorhabditis elegans Hypothetical
           protein ZC328.1 protein.
          Length = 202

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 199 IIFYVVGHKNSSLRDKLFLIFSDILVINFRNS 294
           I FYV+ HK+ S+   LF I + I V++   S
Sbjct: 53  ICFYVMSHKSDSIGKWLFYIQAGITVLSLLTS 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,694,608
Number of Sequences: 27780
Number of extensions: 228866
Number of successful extensions: 480
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)