Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0207.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p pro...   147   1e-35
AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA...   147   1e-35

>AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p
           protein.
          Length = 501

 Score =  147 bits (356), Expect = 1e-35
 Identities = 84/169 (49%), Positives = 97/169 (57%)
 Frame = -2

Query: 508 NIEKKLDXLQEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLKLCX 329
           ++EKKLD LQE            PIE S              RYA+TEFRK ANR+    
Sbjct: 331 DVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGD 390

Query: 328 XXXXXXXXXXXXXXXHDRQV*HGPNRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRR 149
                             +   G  RLPQ+DEKTKVRISKT          YGG T+++R
Sbjct: 391 IEEDAYQGDLGYSRGTIGKTGTGRIRLPQVDEKTKVRISKTLHKNLQKQQVYGGNTTVKR 450

Query: 148 QVSGTASSVAFTPLQGLEIVNPQAAETRTNEGNAKYFSNTSGFLSVGKK 2
           Q+SGTASSVAFTPLQGLEIVNPQAAE    E NAKYFSNTSGF+SVG++
Sbjct: 451 QISGTASSVAFTPLQGLEIVNPQAAERSQTEANAKYFSNTSGFMSVGQR 499


>AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA
           protein.
          Length = 501

 Score =  147 bits (356), Expect = 1e-35
 Identities = 84/169 (49%), Positives = 97/169 (57%)
 Frame = -2

Query: 508 NIEKKLDXLQEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLKLCX 329
           ++EKKLD LQE            PIE S              RYA+TEFRK ANR+    
Sbjct: 331 DVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGD 390

Query: 328 XXXXXXXXXXXXXXXHDRQV*HGPNRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRR 149
                             +   G  RLPQ+DEKTKVRISKT          YGG T+++R
Sbjct: 391 IEEDAYQGDLGYSRGTIGKTGTGRIRLPQVDEKTKVRISKTLHKNLQKQQVYGGNTTVKR 450

Query: 148 QVSGTASSVAFTPLQGLEIVNPQAAETRTNEGNAKYFSNTSGFLSVGKK 2
           Q+SGTASSVAFTPLQGLEIVNPQAAE    E NAKYFSNTSGF+SVG++
Sbjct: 451 QISGTASSVAFTPLQGLEIVNPQAAERSQTEANAKYFSNTSGFMSVGQR 499


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,261,873
Number of Sequences: 53049
Number of extensions: 338787
Number of successful extensions: 817
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)