Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0205.Seq
         (329 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p pro...    28   2.5  
U55321-1|AAC69250.1| 1001|Drosophila melanogaster two P domain p...    27   4.3  
BT023951-1|ABB36455.1| 1001|Drosophila melanogaster GH16237p pro...    27   4.3  
AY058455-1|AAL13684.1|  491|Drosophila melanogaster GH25390p pro...    27   4.3  
AE014298-1521|AAF47972.1| 1001|Drosophila melanogaster CG1615-PB...    27   4.3  
AE014298-1520|AAN09276.1| 1001|Drosophila melanogaster CG1615-PA...    27   4.3  
BT025932-1|ABG02176.1|  918|Drosophila melanogaster IP13252p pro...    27   7.5  
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro...    27   7.5  
AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.     27   7.5  
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    27   7.5  
AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protei...    27   7.5  
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei...    27   7.5  
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ...    27   7.5  
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB...    27   7.5  
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD...    27   7.5  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    27   7.5  
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA...    27   7.5  
AE013599-1459|AAM68673.2|  762|Drosophila melanogaster CG30049-P...    27   7.5  

>AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p
           protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 218 TRACLNFFTLTFRALGRNHIASTPARAIAMLCFN*TVGFPLSVPVL 81
           T AC+ + T+ F  +G  +IA+   +  A +     VGF L   VL
Sbjct: 17  TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62


>U55321-1|AAC69250.1| 1001|Drosophila melanogaster two P domain
           potassium channelORK1 protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 99  LVRASSELTVERR-SYRIVPIAHETKPTRPXG 7
           L+  SS+  ++RR S R  P+A E  PT P G
Sbjct: 900 LMEQSSQTALQRRLSLRPSPLARELSPTSPPG 931


>BT023951-1|ABB36455.1| 1001|Drosophila melanogaster GH16237p
           protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 99  LVRASSELTVERR-SYRIVPIAHETKPTRPXG 7
           L+  SS+  ++RR S R  P+A E  PT P G
Sbjct: 900 LMEQSSQTALQRRLSLRPSPLARELSPTSPPG 931


>AY058455-1|AAL13684.1|  491|Drosophila melanogaster GH25390p
           protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 99  LVRASSELTVERR-SYRIVPIAHETKPTRPXG 7
           L+  SS+  ++RR S R  P+A E  PT P G
Sbjct: 390 LMEQSSQTALQRRLSLRPSPLARELSPTSPPG 421


>AE014298-1521|AAF47972.1| 1001|Drosophila melanogaster CG1615-PB,
           isoform B protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 99  LVRASSELTVERR-SYRIVPIAHETKPTRPXG 7
           L+  SS+  ++RR S R  P+A E  PT P G
Sbjct: 900 LMEQSSQTALQRRLSLRPSPLARELSPTSPPG 931


>AE014298-1520|AAN09276.1| 1001|Drosophila melanogaster CG1615-PA,
           isoform A protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 99  LVRASSELTVERR-SYRIVPIAHETKPTRPXG 7
           L+  SS+  ++RR S R  P+A E  PT P G
Sbjct: 900 LMEQSSQTALQRRLSLRPSPLARELSPTSPPG 931


>BT025932-1|ABG02176.1|  918|Drosophila melanogaster IP13252p
           protein.
          Length = 918

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 200 FFTLTFRALGRNHIASTPARAIAMLC 123
           F  + F A+GRN  ++ P   IA++C
Sbjct: 612 FLVIFFPAMGRNRDSANPDMLIALIC 637


>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
          Length = 2409

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99   GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            G   CL K + CDG + C      A C      E++ S G+
Sbjct: 1813 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 1852


>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
          Length = 1678

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 108  DCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            DC+  +  CDG + C        C  C+ ++    +G+
Sbjct: 1339 DCIPASWRCDGQKDCPDKSDEVGCPTCRADQFSCQSGE 1376


>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
            protein.
          Length = 2382

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99   GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            G   CL K + CDG + C      A C      E++ S G+
Sbjct: 1786 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 1825


>AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1449

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
           G   CL K + CDG + C      A C      E++ S G+
Sbjct: 853 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 892


>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1462

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
           G   CL K + CDG + C      A C      E++ S G+
Sbjct: 866 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 905


>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
            protein LRP6 protein.
          Length = 1678

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 108  DCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            DC+  +  CDG + C        C  C+ ++    +G+
Sbjct: 1339 DCIPASWRCDGQKDCPDKSDEVGCPTCRADQFSCQSGE 1376


>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
           isoform B protein.
          Length = 1374

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
           G   CL K + CDG + C      A C      E++ S G+
Sbjct: 778 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 817


>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
           isoform D protein.
          Length = 1450

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
           G   CL K + CDG + C      A C      E++ S G+
Sbjct: 854 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 893


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
            isoform A protein.
          Length = 2786

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 99   GESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            G   CL K + CDG + C      A C      E++ S G+
Sbjct: 2190 GNGQCLKKEEICDGKKNCPNGKDEANCPPSD-YEVRLSGGE 2229


>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
            protein.
          Length = 1678

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 108  DCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGK 221
            DC+  +  CDG + C        C  C+ ++    +G+
Sbjct: 1339 DCIPASWRCDGQKDCPDKSDEVGCPTCRADQFSCQSGE 1376


>AE013599-1459|AAM68673.2|  762|Drosophila melanogaster CG30049-PA
           protein.
          Length = 762

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 200 FFTLTFRALGRNHIASTPARAIAMLC 123
           F  + F A+GRN  ++ P   IA++C
Sbjct: 456 FLVIFFPAMGRNRDSANPDMLIALIC 481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,251,974
Number of Sequences: 53049
Number of extensions: 247479
Number of successful extensions: 583
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)