SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0201.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    38   0.008
AY061367-1|AAL28915.1|  598|Drosophila melanogaster LD29161p pro...    32   0.31 
AF132814-1|AAD24472.1|  598|Drosophila melanogaster myoglianin p...    32   0.31 
AE014135-129|AAN06512.1|  598|Drosophila melanogaster CG1838-PD,...    32   0.31 
AE014135-128|AAN06511.1|  598|Drosophila melanogaster CG1838-PC,...    32   0.31 
AE014135-127|AAN06510.1|  598|Drosophila melanogaster CG1838-PB,...    32   0.31 
AE014135-126|AAF59319.1|  598|Drosophila melanogaster CG1838-PA,...    32   0.31 
AY113228-1|AAM29233.1|  232|Drosophila melanogaster AT10032p pro...    29   2.2  
AM294141-1|CAL26045.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294140-1|CAL26044.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294139-1|CAL26043.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294138-1|CAL26042.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294137-1|CAL26041.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294136-1|CAL26040.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294135-1|CAL26039.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AM294133-1|CAL26037.1|  232|Drosophila melanogaster CG8277 protein.    29   2.2  
AE014296-1336|AAF50509.2|  232|Drosophila melanogaster CG8277-PA...    29   2.2  
AM294134-1|CAL26038.1|  232|Drosophila melanogaster CG8277 protein.    28   5.0  
AE014134-1767|AAF52863.1|  237|Drosophila melanogaster CG13136-P...    28   5.0  
X07656-1|CAA30502.1|  273|Drosophila melanogaster protein ( Dros...    28   6.7  
U26549-1|AAA67954.1|  296|Drosophila melanogaster zinc finger pr...    28   6.7  
BT029412-1|ABK57069.1|  320|Drosophila melanogaster IP02511p pro...    28   6.7  
BT025009-1|ABE01239.1|  296|Drosophila melanogaster IP02509p pro...    28   6.7  
BT003293-1|AAO25053.1| 1095|Drosophila melanogaster GH28834p pro...    28   6.7  
AF181641-1|AAD55427.1| 1095|Drosophila melanogaster norpA protein.     28   6.7  
AE014298-627|AAN09121.1| 1095|Drosophila melanogaster CG3620-PB,...    28   6.7  
AE014298-626|AAF45942.2| 1095|Drosophila melanogaster CG3620-PA,...    28   6.7  
AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,...    28   6.7  
AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,...    28   6.7  
AE014134-157|AAF51453.1|  296|Drosophila melanogaster CG3642-PA ...    28   6.7  
Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor pr...    27   8.8  
AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p pro...    27   8.8  
AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA...    27   8.8  
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    27   8.8  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
 Frame = -1

Query: 437 LSQCDERIRRXLNSVVITTKNRLFHTLRGFTL--KRKNEDPDKEP-KRSRSFFPWKLPFL 267
           ++  D R++R L +  + T+++L   L+ FT   KR   D +  P +++R   P    F 
Sbjct: 155 MANIDSRLQRVLFTSNVRTRSKLQAELKAFTFDKKRHARDDNLGPDQKNRKASPVVCHFC 214

Query: 266 RKTWHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCYVCGDASHVASGCSMRY 87
            K   R   C  +       D  AKP++         +  V+CY CG   H ++ C    
Sbjct: 215 SKPGRRIAECRSKMRQ----DRRAKPQR--------EKSNVTCYRCGQPGHFSNQC---- 258

Query: 86  KKKNDTAPGAVAGATRDVNVC 24
             KN TA        + VN C
Sbjct: 259 -PKNGTAAKQDVTQQKTVNQC 278


>AY061367-1|AAL28915.1|  598|Drosophila melanogaster LD29161p
           protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AF132814-1|AAD24472.1|  598|Drosophila melanogaster myoglianin
           protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AE014135-129|AAN06512.1|  598|Drosophila melanogaster CG1838-PD,
           isoform D protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AE014135-128|AAN06511.1|  598|Drosophila melanogaster CG1838-PC,
           isoform C protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AE014135-127|AAN06510.1|  598|Drosophila melanogaster CG1838-PB,
           isoform B protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AE014135-126|AAF59319.1|  598|Drosophila melanogaster CG1838-PA,
           isoform A protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 80  SSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQV 193
           +SC  W   K HD HHRT    L  ++R+ T +  V +
Sbjct: 4   NSCCGWRKYKTHDQHHRT----LKKKTRQNTSDTTVHI 37


>AY113228-1|AAM29233.1|  232|Drosophila melanogaster AT10032p
           protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294141-1|CAL26045.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294140-1|CAL26044.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294139-1|CAL26043.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294138-1|CAL26042.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294137-1|CAL26041.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294136-1|CAL26040.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294135-1|CAL26039.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294133-1|CAL26037.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AE014296-1336|AAF50509.2|  232|Drosophila melanogaster CG8277-PA
           protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESNSPEPIDEEIYQV--EYKHPLE 58


>AM294134-1|CAL26038.1|  232|Drosophila melanogaster CG8277 protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 110 LHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFE 220
           +H  HH      L   S EP DEE+ QV  EY+   E
Sbjct: 24  IHKHHHHHEGVPLESISPEPIDEEIYQV--EYKHPLE 58


>AE014134-1767|AAF52863.1|  237|Drosophila melanogaster CG13136-PA
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 209 FDIPAKPEQPPHPWAPG-SRLQVSCYVCGDASHVASGCSMRYKKKNDTAPG 60
           F +PA P  PP P+ PG +   ++ +  G+  H A G S  +   + ++PG
Sbjct: 33  FSLPAVPLPPPPPFQPGKNHFALNAFAGGE--HAAGGHS--HSSYSSSSPG 79


>X07656-1|CAA30502.1|  273|Drosophila melanogaster protein (
           Drosophila melanogasterretrotransposon 1731 sequence. ).
          Length = 273

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -1

Query: 194 KPEQPPHPWAPGS--RLQVSCYVCGDASHVASGCSMRYKKKNDTA 66
           KP+ P     P +  R  V CY CG+  H  + C  R K   ++A
Sbjct: 206 KPQAPAREARPSAKKRKDVVCYNCGERRHFKANC-RREKVNKESA 249


>U26549-1|AAA67954.1|  296|Drosophila melanogaster zinc finger
           protein protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 197 AKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 99
           ++P  P     P    +++CY CG+  H A+ C
Sbjct: 249 SQPHGPGFVKVPTPLEEITCYKCGNKGHYANKC 281


>BT029412-1|ABK57069.1|  320|Drosophila melanogaster IP02511p
           protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 197 AKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 99
           ++P  P     P    +++CY CG+  H A+ C
Sbjct: 273 SQPHGPGFVKVPTPLEEITCYKCGNKGHYANKC 305


>BT025009-1|ABE01239.1|  296|Drosophila melanogaster IP02509p
           protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 197 AKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 99
           ++P  P     P    +++CY CG+  H A+ C
Sbjct: 249 SQPHGPGFVKVPTPLEEITCYKCGNKGHYANKC 281


>BT003293-1|AAO25053.1| 1095|Drosophila melanogaster GH28834p
           protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AF181641-1|AAD55427.1| 1095|Drosophila melanogaster norpA protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AE014298-627|AAN09121.1| 1095|Drosophila melanogaster CG3620-PB,
           isoform B protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AE014298-626|AAF45942.2| 1095|Drosophila melanogaster CG3620-PA,
           isoform A protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,
           isoform D protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,
           isoform C protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 230 RYCSQTFFDIPAKPEQPPHPWAPGSRLQVSC 138
           +YC   F D+  K   P HP  PG  L   C
Sbjct: 428 KYCDDFFGDLLLKEPLPDHPLDPGLPLPPPC 458


>AE014134-157|AAF51453.1|  296|Drosophila melanogaster CG3642-PA
           protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 197 AKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 99
           ++P  P     P    +++CY CG+  H A+ C
Sbjct: 249 SQPHGPGFVKVPTPLEEITCYKCGNKGHYANKC 281


>Y07662-1|CAA68943.1|  949|Drosophila melanogaster GATA factor
           protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 44  LHLPQHLEQCRFSSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFES 223
           LH  Q  +Q  +        Q+ H  HH    S   G+S  P+    +  L  +  +  S
Sbjct: 103 LHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSAGGDS--PSSSHALSTLQSF-TQLTS 159

Query: 224 SICRNTL--RHDARFSAEMAASTEKN 295
           +  R++L   +DA F+A    S+ +N
Sbjct: 160 ATQRDSLSPENDAYFAAAQLGSSLQN 185


>AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p
           protein.
          Length = 950

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 44  LHLPQHLEQCRFSSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFES 223
           LH  Q  +Q  +        Q+ H  HH    S   G+S  P+    +  L  +  +  S
Sbjct: 103 LHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSAGGDS--PSSSHALSTLQSF-TQLTS 159

Query: 224 SICRNTL--RHDARFSAEMAASTEKN 295
           +  R++L   +DA F+A    S+ +N
Sbjct: 160 ATQRDSLSPENDAYFAAAQLGSSLQN 185


>AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA,
           isoform A protein.
          Length = 1264

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 44  LHLPQHLEQCRFSSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFES 223
           LH  Q  +Q  +        Q+ H  HH    S   G+S  P+    +  L  +  +  S
Sbjct: 417 LHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSAGGDS--PSSSHALSTLQSF-TQLTS 473

Query: 224 SICRNTL--RHDARFSAEMAASTEKN 295
           +  R++L   +DA F+A    S+ +N
Sbjct: 474 ATQRDSLSPENDAYFAAAQLGSSLQN 499


>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 44  LHLPQHLEQCRFSSCSAWNTQKLHDSHHRTRNS*LAGESREPTDEEVVQVLLEYRKKFES 223
           LH  Q  +Q  +        Q+ H  HH    S   G+S  P+    +  L  +  +  S
Sbjct: 417 LHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSAGGDS--PSSSHALSTLQSF-TQLTS 473

Query: 224 SICRNTL--RHDARFSAEMAASTEKN 295
           +  R++L   +DA F+A    S+ +N
Sbjct: 474 ATQRDSLSPENDAYFAAAQLGSSLQN 499


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,381,055
Number of Sequences: 53049
Number of extensions: 439576
Number of successful extensions: 1463
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -