Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0201.Seq
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.50
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.50
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.50
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 0.67
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 2.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 2.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 2.7
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 2.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 2.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 4.7
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 6.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 6.2
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.50
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 334 KTKILIKNQNALEVFFRGSC 275
K K LIK++N FF GSC
Sbjct: 515 KRKGLIKSENEAADFFSGSC 534
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.50
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 334 KTKILIKNQNALEVFFRGSC 275
K K LIK++N FF GSC
Sbjct: 515 KRKGLIKSENEAADFFSGSC 534
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.50
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 334 KTKILIKNQNALEVFFRGSC 275
K K LIK++N FF GSC
Sbjct: 515 KRKGLIKSENEAADFFSGSC 534
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 24.2 bits (50), Expect = 0.67
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 400 TLSLLPQKIVYFTHYVALPS 341
+L+L QK Y++HYVA S
Sbjct: 452 SLNLAAQKREYYSHYVAFKS 471
Score = 20.6 bits (41), Expect = 8.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 375 SSISHITWLYP 343
S +SH W+YP
Sbjct: 541 SGLSHGNWIYP 551
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 259 PGIVPKGVATDTALKLFSIFQQNLNN 182
PG+ + V D + F F+ LNN
Sbjct: 446 PGVSIESVTVDKLITYFDHFESMLNN 471
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 259 PGIVPKGVATDTALKLFSIFQQNLNN 182
PG+ + V D + F F+ LNN
Sbjct: 446 PGVSIESVTVDKLITYFDHFESMLNN 471
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 63 WSSVVFLLVAHGTPRSYMTRITAHVTA 143
W ++ + GTPRS+ R+ V A
Sbjct: 618 WGVLLNSGIGEGTPRSFSARVLGMVWA 644
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 259 PGIVPKGVATDTALKLFSIFQQNLNN 182
PG+ + V D + F F+ LNN
Sbjct: 72 PGVSIESVTVDKLITYFDHFESMLNN 97
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 2.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 163 GAHG*GGCSGFAGISKKV*EQYLSQHPSARCQVFRRN 273
G H GC GF S + QY + +C + R N
Sbjct: 80 GVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRIN 116
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +2
Query: 173 DEEVVQVLLEYRKKFESSICRNTLRHDARFSAEMAASTEKN 295
+E++ ++++ ++F SSI + D+R ST+ N
Sbjct: 648 NEDMEKLMMLKHREFRSSIKASDKLKDSRIKTTEKLSTDPN 688
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = -1
Query: 311 PKRSRSFFPWKLPFLRKTWHRAEGC 237
PK S++ P P+ WH C
Sbjct: 218 PKHSKTKSPKLRPYPNWEWHTVGNC 242
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 161 REPTDEEVVQVLLEYRKK 214
RE T+E ++LLE++K+
Sbjct: 140 REQTEEMYREMLLEHKKR 157
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,553
Number of Sequences: 438
Number of extensions: 2626
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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