Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0200.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047569-1|AAK77301.1|  336|Drosophila melanogaster GH08163p pro...    29   4.1  
AE014297-1310|AAN13507.1|  298|Drosophila melanogaster CG5308-PB...    29   4.1  
AE014297-1309|AAF54647.2|  336|Drosophila melanogaster CG5308-PA...    29   4.1  
BT011014-1|AAR30174.1|  139|Drosophila melanogaster RH62559p pro...    29   5.5  
AE014134-3069|AAF53784.1|  182|Drosophila melanogaster CG13086-P...    29   5.5  
AE013599-2308|AAF57982.2|  139|Drosophila melanogaster CG8317-PA...    29   5.5  

>AY047569-1|AAK77301.1|  336|Drosophila melanogaster GH08163p
           protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 379 LAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNFDGFDTVYDKNQD 245
           L  P++   R S  Y   +  A  L+ +   N+D  D V+D   D
Sbjct: 53  LTAPVDKQSRRSSQYFGHLAAAEELSNLIPDNYDAIDPVFDNTTD 97


>AE014297-1310|AAN13507.1|  298|Drosophila melanogaster CG5308-PB,
           isoform B protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 379 LAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNFDGFDTVYDKNQD 245
           L  P++   R S  Y   +  A  L+ +   N+D  D V+D   D
Sbjct: 15  LTAPVDKQSRRSSQYFGHLAAAEELSNLIPDNYDAIDPVFDNTTD 59


>AE014297-1309|AAF54647.2|  336|Drosophila melanogaster CG5308-PA,
           isoform A protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 379 LAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNFDGFDTVYDKNQD 245
           L  P++   R S  Y   +  A  L+ +   N+D  D V+D   D
Sbjct: 53  LTAPVDKQSRRSSQYFGHLAAAEELSNLIPDNYDAIDPVFDNTTD 97


>BT011014-1|AAR30174.1|  139|Drosophila melanogaster RH62559p
           protein.
          Length = 139

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 224 HMRIDFEQPTE-EQAESVVAEPDFIFNKPYFFLILNKY 114
           H  +D E P +   + S +A+PD + +KPYF  +   Y
Sbjct: 34  HALLDIETPNQFNYSPSPLAQPDSLRSKPYFDFLSTLY 71


>AE014134-3069|AAF53784.1|  182|Drosophila melanogaster CG13086-PA
           protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = -3

Query: 192 RAS*KRGCRARLHLQQAL---FLLDSQQIQCTRFRWPYHALSFKKVIKIQDEIQRLHS 28
           RA+ K+  R RLH+  AL   FL+++  ++ TR R PY  +       + DE + LH+
Sbjct: 4   RATRKKYRRIRLHIFLALSLWFLIEAHPVEGTRCRNPYERVRENYCYFVADE-EPLHT 60


>AE013599-2308|AAF57982.2|  139|Drosophila melanogaster CG8317-PA
           protein.
          Length = 139

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 224 HMRIDFEQPTE-EQAESVVAEPDFIFNKPYFFLILNKY 114
           H  +D E P +   + S +A+PD + +KPYF  +   Y
Sbjct: 34  HALLDIETPNQFNYSPSPLAQPDSLRSKPYFDFLSTLY 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,353,404
Number of Sequences: 53049
Number of extensions: 420154
Number of successful extensions: 949
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)