Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0200.Seq
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    29   1.7  
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    29   1.7  
AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical ...    29   2.2  
AC024759-8|AAK68431.1|  551|Caenorhabditis elegans Hypothetical ...    29   2.9  
L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical pr...    28   5.1  
L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z68227-17|CAA92508.2|  348|Caenorhabditis elegans Hypothetical p...    27   6.7  

>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 191 EQAESVVAEP-DFIFNKPYFFLILNKYNAPGFVGL 90
           + A  V+ EP DF  + P+FF +L+K N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFF-VLSKDNHPLFVGL 364


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 191 EQAESVVAEP-DFIFNKPYFFLILNKYNAPGFVGL 90
           + A  V+ EP DF  + P+FF +L+K N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFF-VLSKDNHPLFVGL 364


>AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical
           protein B0524.4 protein.
          Length = 772

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -2

Query: 487 GLSLNDXEDLSVAFNKLRDPATLPYILTQTESKYLKLAVPIELTLR-DSRDYVPE 326
           GLS+ND + L+  FN L D       + + E++ L L+   ELT   D+   VP+
Sbjct: 104 GLSVNDVKSLADGFNGLIDSLQADDAVKKVENRLLMLSEVWELTKGIDASPVVPD 158


>AC024759-8|AAK68431.1|  551|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.1 protein.
          Length = 551

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
 Frame = -2

Query: 520 VYLKVVFPSSWGLSLNDXEDLSVAFNKLR-DPATLPYILTQTESKYLKLAVPI---ELTL 353
           +Y KV+FP       ND  D ++  N +         ++ +   +YL LA  +   ++++
Sbjct: 145 LYHKVLFP-------NDYYDSALTVNAIIVSKCDEARLIRRNIIRYLVLAQILTFRDISI 197

Query: 352 RDSRDY--VPEVKRAGLLTEIFEKNFDGFDTVYDK 254
           R  R +  +  +K+AG LT+  E+  +G D  Y+K
Sbjct: 198 RVRRRFPNIDSIKKAGFLTDNEEELLEGIDLAYNK 232


>L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical
           protein F42H10.7b protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -2

Query: 451 AFNKLRDPATLPYILTQTESKYLKLAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNF 281
           +F+K  + A L    +  E K +KL+    +T +  R  VPE K    L +I EK++
Sbjct: 3   SFDKNDERAQLMVPKSINEGKVVKLSQKTLVTKKIERQVVPEEKYIAGLDKIIEKDY 59


>L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical
           protein F42H10.7a protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -2

Query: 451 AFNKLRDPATLPYILTQTESKYLKLAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNF 281
           +F+K  + A L    +  E K +KL+    +T +  R  VPE K    L +I EK++
Sbjct: 3   SFDKNDERAQLMVPKSINEGKVVKLSQKTLVTKKIERQVVPEEKYIAGLDKIIEKDY 59


>Z68227-17|CAA92508.2|  348|Caenorhabditis elegans Hypothetical
           protein F49C12.3 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 210 VNTHMAQHMGYIS*FLS*TVSKPSKFFSKISVKSPALL 323
           + T++  H GY   FLS +V+  S +F  +    PAL+
Sbjct: 220 IMTYLCGHNGYKCEFLSYSVASSSNYFETLREYVPALI 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,738,082
Number of Sequences: 27780
Number of extensions: 226119
Number of successful extensions: 660
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)