Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0197.Seq
(558 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 148 3e-36
03_01_0547 + 4093196-4093657,4094267-4095148 148 3e-36
03_01_0544 + 4082528-4082989,4083585-4084466 148 3e-36
03_01_0543 + 4076981-4077442,4078145-4079026 148 3e-36
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 100 9e-22
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 95 4e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 94 8e-20
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 94 8e-20
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 91 4e-19
02_04_0462 + 23131433-23132836 66 2e-11
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 65 4e-11
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 33 0.12
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.27
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.36
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 31 0.47
02_04_0148 - 20198407-20201424 31 0.47
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 0.82
03_05_0511 + 25056018-25059107 31 0.82
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.1
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.4
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.9
04_01_0103 + 1082077-1082167,1083037-1085477 29 1.9
02_04_0017 + 18937774-18937864,18938505-18940945 29 1.9
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 29 1.9
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.9
09_06_0237 + 21788886-21789965 29 2.5
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 2.5
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 2.5
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 29 2.5
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 3.3
01_01_0016 - 88825-90411 29 3.3
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 4.4
03_02_0131 - 5796564-5796605,5797188-5797421,5798415-5798717,579... 28 4.4
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 5.8
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 28 5.8
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 7.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 100 bits (239), Expect = 9e-22
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 77
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREH LLA TLGV +L+V +NKM
Sbjct: 78 QTREHVLLAKTLGVSKLVVVINKM 101
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 426
+S+ R++EI+ ++ ++K GYN V F+PISG G NM K W+ G
Sbjct: 108 WSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNCSWWSG 162
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 94.7 bits (225), Expect = 4e-20
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 169
T+++ FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGY 118
Query: 170 XKNGQTREHALLAFTLGVKQLIVGVNKM 253
K GQTREH LLA TLGV +LIV +NKM
Sbjct: 119 EKGGQTREHVLLAKTLGVAKLIVVINKM 146
Score = 34.7 bits (76), Expect = 0.051
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 390
+S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 153 WSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 93.9 bits (223), Expect = 8e-20
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKN- 178
T+ + + ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 179 ----GQTREHALLAFTLGVKQLIVGVNKM 253
GQT+EHA L + GV+QLIV VNKM
Sbjct: 372 GKSVGQTKEHAQLIRSFGVEQLIVAVNKM 400
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 429
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 93.9 bits (223), Expect = 8e-20
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKN- 178
T+ + + ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 179 ----GQTREHALLAFTLGVKQLIVGVNKM 253
GQT+EHA L + GV+QLIV VNKM
Sbjct: 372 GKSVGQTKEHAQLIRSFGVEQLIVAVNKM 400
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 429
YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKN- 178
T+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N
Sbjct: 299 TMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGING 358
Query: 179 -GQTREHALLAFTLGVKQLIVGVNKM 253
GQT+EH+ L + GV LIV VNKM
Sbjct: 359 IGQTKEHSQLVRSFGVDNLIVVVNKM 384
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 450
YS+ RF IK ++ ++++ GY +AVA+VPIS +N++ ++ W
Sbjct: 389 YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY------ 441
Query: 451 KADGKCLIESSRCHPATCPPLTXPCVFP 534
DG CL+++ P ++ P P
Sbjct: 442 --DGNCLLKAIDTLPPPSRDVSKPLRLP 467
>02_04_0462 + 23131433-23132836
Length = 467
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TI+ ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 120 TINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 172
Query: 182 QTREHALLAFTLGVKQLIVGVNK 250
QT+EH LLA +GV +++V +NK
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLNK 195
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 64.9 bits (151), Expect = 4e-11
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = +2
Query: 23 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHAL 202
++ET+K + +D PGH D++KNMITG +Q D +L+V+A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 203 LAFTLGVKQLIVGVNKM 253
LA +GV L+ +NK+
Sbjct: 177 LARQVGVPSLVCFLNKV 193
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 44 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGV 223
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 224 KQLIVGVNKM 253
+ +I+ NK+
Sbjct: 203 QHIIILQNKI 212
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
Y I+D PGH +F M AD AVL+V A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+T +D PGH F G + D VL+VAA G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHAL 202
Y V IID PGH DF + D A+L++ + G I + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 30.7 bits (66), Expect = 0.82
Identities = 26/93 (27%), Positives = 41/93 (44%)
Frame = +2
Query: 29 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLA 208
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 209 FTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRK 307
F + +I +NK ++ T PD K++ K
Sbjct: 183 FESNL-SIIPVINK---IDQPTADPDNVKAQLK 211
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 23 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
K + + Y + +ID+PGH DF + D A+++V
Sbjct: 92 KRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 35 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 35 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 35 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>09_06_0237 + 21788886-21789965
Length = 359
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF----EAGI-----XKNGQTREHALL 205
+I + F + ++ SQ DC +V G G F AG+ N A++
Sbjct: 261 VIRRSWNETFPRELVAAHSQYDCPGNLVYVGDGRFCICWVAGVEHDRPETNDMVARTAVV 320
Query: 206 AFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPH 316
+ +++ G ++ L +H +SP R++ PH
Sbjct: 321 TMAVRLRRSAGGELQLTKLRYHLMSPQGRRAYFVQPH 357
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 327 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 428
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 327 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 428
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+ ++D PGH DF + + AVL+V AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 428 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 339
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>01_01_0016 - 88825-90411
Length = 528
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 238 YDELFDTEGESEQGMLTGLTVLXDTSFEFTGTGSYDEHSA 119
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>03_02_0131 -
5796564-5796605,5797188-5797421,5798415-5798717,
5799260-5799847,5800594-5800749,5800861-5800919,
5801935-5802262
Length = 569
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 348 SSWVVANLLDV*GYFLLDFLKSGLTVWWFSGTI 250
++W N+ + ++L + LKSGLT+W F GT+
Sbjct: 461 AAWRKTNIRETYHFWLKENLKSGLTLWKF-GTL 492
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 169 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 35
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 408
STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 324 STEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 169 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 35
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 327 DRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,115,939
Number of Sequences: 37544
Number of extensions: 353666
Number of successful extensions: 1159
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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