Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0197.Seq
(558 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 172 2e-45
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 172 2e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 168 3e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 168 3e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 4.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.4
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 172 bits (418), Expect = 2e-45
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI KNG
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 74
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 75 QTREHALLAFTLGVKQLIVGVNKM 98
Score = 154 bits (374), Expect = 5e-40
Identities = 73/101 (72%), Positives = 76/101 (75%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 435
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW V
Sbjct: 100 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTV 159
Query: 436 ERKEGKADGKCLIESSRCHPATCPPLTXPCVFPCXTYXKIG 558
ERKEGK +GKCLIE+ P P KIG
Sbjct: 160 ERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIG 200
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 172 bits (418), Expect = 2e-45
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI KNG
Sbjct: 72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKM 155
Score = 154 bits (374), Expect = 5e-40
Identities = 73/101 (72%), Positives = 76/101 (75%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 435
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW V
Sbjct: 157 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTV 216
Query: 436 ERKEGKADGKCLIESSRCHPATCPPLTXPCVFPCXTYXKIG 558
ERKEGK +GKCLIE+ P P KIG
Sbjct: 217 ERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIG 257
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 168 bits (409), Expect = 3e-44
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGI KNG
Sbjct: 72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKM 155
Score = 143 bits (346), Expect = 1e-36
Identities = 67/100 (67%), Positives = 73/100 (73%)
Frame = +1
Query: 259 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVE 438
T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VE
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVE 217
Query: 439 RKEGKADGKCLIESSRCHPATCPPLTXPCVFPCXTYXKIG 558
RK+G ADGK LIE+ P P KIG
Sbjct: 218 RKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIG 257
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 168 bits (409), Expect = 3e-44
Identities = 80/82 (97%), Positives = 80/82 (97%)
Frame = +2
Query: 8 DIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQT 187
DI LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI KNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 188 REHALLAFTLGVKQLIVGVNKM 253
REHALLAFTLGVKQLIVGVNKM
Sbjct: 61 REHALLAFTLGVKQLIVGVNKM 82
Score = 154 bits (373), Expect = 7e-40
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 435
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW V
Sbjct: 84 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTV 143
Query: 436 ERKEGKADGKCLIES 480
ERKEGK +GKCLIE+
Sbjct: 144 ERKEGKVEGKCLIEA 158
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 133
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 133
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 226 TAHRRSKQNGSTEPPYSEPRFEEIKKEV 309
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 408 FG*RLQHVVSVPSRNGHESDSSWV 337
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,549
Number of Sequences: 438
Number of extensions: 3294
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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