Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0197.Seq
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 148 3e-36
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 148 3e-36
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 148 3e-36
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 148 3e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 99 2e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 90 1e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 63 1e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 37 0.010
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 37 0.010
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.024
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.032
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.098
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.098
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.13
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.17
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.17
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.69
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.69
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.69
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.6
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 29 2.8
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 29 2.8
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 3.7
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 3.7
At3g19000.1 68416.m02411 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 3.7
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 4.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 4.9
At5g64600.1 68418.m08118 expressed protein similar to axi 1 [Nic... 27 6.4
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 27 8.5
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 8.5
At3g63410.1 68416.m07139 chloroplast inner envelope membrane pro... 27 8.5
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 27 8.5
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 27 8.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.4 bits (202), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.4 bits (202), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.4 bits (202), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 148 bits (358), Expect = 3e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TIDI LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI K+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 85.4 bits (202), Expect = 2e-17
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 256 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 426
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 182 QTREHALLAFTLGVKQLIVGVNKM 253
QTREH LA TLGV +LIV VNKM
Sbjct: 226 QTREHVQLAKTLGVSKLIVVVNKM 249
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 426
+S+ R++EI++++ ++K GYN V F+PISG G NM + + PW+ G
Sbjct: 256 WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 89.8 bits (213), Expect = 1e-18
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXK-N 178
T+ + + F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363
Query: 179 GQTREHALLAFTLGVKQLIVGVNKM 253
GQTREHA + GV+Q+IV +NKM
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKM 388
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 271 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTK--MPWFKG 426
YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS W++G
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNRLSSWYQG 447
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +2
Query: 2 TIDIXLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNG 181
TI+ ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181
Query: 182 QTREHALLAFTLGVKQLIVGVNK 250
QT+EH LLA +GV ++V +NK
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNK 204
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2
Query: 23 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHAL 202
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 203 LAFTLGVKQLIVGVNKM 253
LA +GV L+ +NK+
Sbjct: 177 LARQVGVPSLVCFLNKV 193
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAF 211
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 212 TLGVKQLIVGVNKMVPLN 265
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAF 211
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 212 TLGVKQLIVGVNKMVPLN 265
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.5 bits (78), Expect = 0.024
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +2
Query: 26 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTRE 193
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 194 HALLAFTLGVKQLIVGVNKM 253
H + +K +I+ NK+
Sbjct: 166 HLAAVEIMQLKHIIILQNKI 185
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 35.1 bits (77), Expect = 0.032
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 44 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGV 223
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 224 KQLIVGVNKM 253
K +I+ NK+
Sbjct: 174 KDIIIIQNKI 183
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.098
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.098
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 32 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 29 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 26 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 30.7 bits (66), Expect = 0.69
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREH 196
Y V IID PGH DF + D A+L++ + G I + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 30.7 bits (66), Expect = 0.69
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 41 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREH 196
Y V IID PGH DF + D A+L++ + G I + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 53 IIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 35 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 47 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 136
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 250 NGSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 369
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 250 NGSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 369
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 327 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 428
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 274 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 363
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g19000.1 68416.m02411 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|P24397 Hyoscyamine
6-dioxygenase (EC 1.14.11.11) (Hyoscyamine 6-beta-
hydroxylase) {Hyoscyamus niger}, SP|Q05965
Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)
(Flavonone- 3-hydroxylase) (F3H) (FHT) {Matthiola
incana}; contains Pfam profile PF03171: oxidoreductase,
2OG-Fe(II) oxygenase family
Length = 352
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 510 WRAGGRMASRAFNEAFSVSFAFFTLHLPSLEP 415
W A R+ E FS+ F FF H ++EP
Sbjct: 276 WSAEHRVVVNTSKERFSIPFFFFPSHEANIEP 307
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 280 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 390
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 56 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 151
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g64600.1 68418.m08118 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 522
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 217 RCQTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG--DNM 390
R T+H + K STE E KEV ++K +GY+ + V ++ +G D +
Sbjct: 313 RESTSHWKIKSINSTEQR-EEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRL 371
Query: 391 LEPSTKMP 414
E ++ P
Sbjct: 372 SELKSRFP 379
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 35 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAFT 214
++Y +D PG ++ ++ G + LIVAA T F + + + F
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFP 61
Query: 215 LGVKQLIVGVNKMVPLNHHTVSPDLRKS 298
G+ IV + P + V+ +L+++
Sbjct: 62 DGIPVTIVDTSSR-PEDRDIVAEELKRA 88
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 8.5
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 229 LFDTEGESEQGMLTGLTVLXDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 56
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
>At3g63410.1 68416.m07139 chloroplast inner envelope membrane
protein, putative (APG1) similar to SP|P23525 37 kDa
inner envelope membrane protein, chloroplast precursor
(E37) {Spinacia oleracea}; contains Pfam profile
PF01209: methlytransferase, UbiE/COQ5 family
Length = 338
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 214 PRCQTAHRRSKQNGSTEPPYSEPRFEEIKKE 306
PR A R S + S+ P ++PRF + KKE
Sbjct: 42 PRLSVATRCSSSSVSSSRPSAQPRFIQHKKE 72
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +1
Query: 277 EPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 390
+ + IKK++ ++ +I Y + + + GW G ++
Sbjct: 174 DDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSL 211
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 391 LEPSTKMPWFKGWQVERKEGKADGKCLIESSRCH 492
++ T W KG++V EGK CL E+ H
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAH 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,430,999
Number of Sequences: 28952
Number of extensions: 264281
Number of successful extensions: 874
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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