Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0194.Seq
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 173 3e-42
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 155 5e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 153 3e-36
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 149 3e-35
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 149 4e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 141 9e-33
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 140 3e-32
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 116 5e-25
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 92 9e-18
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 89 5e-17
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 89 9e-17
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 88 1e-16
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 85 8e-16
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 85 8e-16
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 84 2e-15
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 84 2e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 83 6e-15
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 81 2e-14
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 79 5e-14
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 79 9e-14
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 77 3e-13
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 76 5e-13
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 75 1e-12
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 75 1e-12
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 73 5e-12
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 70 3e-11
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 68 2e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 67 2e-10
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 65 9e-10
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 59 6e-08
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 58 1e-07
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 56 6e-07
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 54 3e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 53 4e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 53 4e-06
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 53 4e-06
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 52 1e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 52 1e-05
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 50 5e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 49 6e-05
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 48 1e-04
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 48 1e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 48 2e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 47 3e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 6e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 46 6e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 46 8e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 45 0.001
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 45 0.001
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 44 0.002
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 43 0.004
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 41 0.022
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 41 0.022
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 40 0.030
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 40 0.039
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.052
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.052
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 40 0.052
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 39 0.091
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 39 0.091
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.12
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 38 0.12
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 38 0.21
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.21
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 37 0.28
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 37 0.28
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 37 0.28
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 37 0.37
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 37 0.37
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 36 0.64
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 1.1
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 2.6
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 33 3.4
UniRef50_UPI0000E8028C Cluster: PREDICTED: hypothetical protein;... 33 4.5
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 4.5
UniRef50_A7S8R4 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.5
UniRef50_Q5RGG6 Cluster: Novel protein similar to vertebrate del... 33 6.0
UniRef50_A5K2K1 Cluster: RNA-binding protein, putative; n=8; Pla... 33 6.0
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q15VP0 Cluster: Putative uncharacterized protein precur... 32 7.9
UniRef50_A4VQ17 Cluster: Putative DNA helicase; n=1; Pseudomonas... 32 7.9
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 32 7.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 173 bits (420), Expect = 3e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
RTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTV
Sbjct: 121 RTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTV 180
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
PCKVTG+CGSV VRLIPAPRGTGI
Sbjct: 181 PCKVTGRCGSVLVRLIPAPRGTGI 204
Score = 85.4 bits (202), Expect = 8e-16
Identities = 40/64 (62%), Positives = 43/64 (67%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSP
Sbjct: 206 SAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSP 265
Query: 73 YSEF 62
Y EF
Sbjct: 266 YQEF 269
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 155 bits (377), Expect = 5e-37
Identities = 73/92 (79%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -1
Query: 528 ETNTCR-TRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 352
+ TC RTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++P+R+GYWGN
Sbjct: 57 QKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIVPLRQGYWGN 116
Query: 351 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
KIGKP+TVPCKVTG CGSV V LIPAPRGTG+
Sbjct: 117 KIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGM 148
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL MAG+ DCYTSAR T +LGNF YLTPDLW++ TKSP
Sbjct: 150 SAPVPKKLLMMAGIDDCYTSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFTKSP 209
Query: 73 YSEF 62
Y EF
Sbjct: 210 YEEF 213
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 153 bits (371), Expect = 3e-36
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
RTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTV
Sbjct: 94 RTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTV 153
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P KV+GKCGSVTVRL+PAPRG G+
Sbjct: 154 PVKVSGKCGSVTVRLVPAPRGAGL 177
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
+APV K+ LQ+AG++DCYT +RGST TLGNF LTP+LW + P ++P
Sbjct: 179 AAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTPNLWAERPFGQTP 238
Query: 73 YSEF 62
E+
Sbjct: 239 IEEY 242
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 149 bits (362), Expect = 3e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 327 PCKVTGKCGSVTVRLIPAPRGTG 259
P KVTG+CGSV VRLIPAPRGTG
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTG 143
Score = 52.8 bits (121), Expect = 5e-06
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLG 167
SAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 146 SAPVPKKLLMMAGIDDCYTSARGHTATWG 174
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 149 bits (361), Expect = 4e-35
Identities = 69/87 (79%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = -1
Query: 528 ETNTCRTR-TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 352
+ TC + TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGN
Sbjct: 53 QKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGN 112
Query: 351 KIGKPHTVPCKVTGKCGSVTVRLIPAP 271
KIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 113 KIGKPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 141 bits (342), Expect = 9e-33
Identities = 63/88 (71%), Positives = 75/88 (85%)
Frame = -1
Query: 519 TCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 340
T R RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+
Sbjct: 107 TAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGE 166
Query: 339 PHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
PHT+P KV GKCGSV VRLIPAPRG GI
Sbjct: 167 PHTIPTKVHGKCGSVHVRLIPAPRGAGI 194
Score = 52.4 bits (120), Expect = 7e-06
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = -3
Query: 238 KKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 62
KK+L MAG+ D YT +RG T TLGN +LTPDLW + K P EF
Sbjct: 201 KKVLAMAGLHDVYTCSRGHTRTLGNSVKATYEALKNSYGFLTPDLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 140 bits (338), Expect = 3e-32
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
RTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G+PH++
Sbjct: 95 RTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSL 154
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
K TGKCGSVTVRLIPAPRG+GI
Sbjct: 155 ATKTTGKCGSVTVRLIPAPRGSGI 178
Score = 52.8 bits (121), Expect = 5e-06
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
++P KKLLQ+AGV+D YT + G T TL N +LTP+LW + PL SP
Sbjct: 180 ASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 116 bits (278), Expect = 5e-25
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W GKPHTV
Sbjct: 82 KTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTV 141
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
CK +GKCG+ V++IPAPRGTGI
Sbjct: 142 SCKGSGKCGTSVVQVIPAPRGTGI 165
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
S V KK+ ++AG++D YT + G+T T NF + PD W + P T +P
Sbjct: 167 SGSVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAALEATSSMILPDQWEEKPRTLNP 226
Query: 73 YSEF 62
EF
Sbjct: 227 LLEF 230
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 91.9 bits (218), Expect = 9e-18
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -1
Query: 519 TCRTR-TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 343
TC + TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++
Sbjct: 100 TCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL- 151
Query: 342 KPHTVPCKVTGKCGSVTVRLIPAPRGTG 259
+PH VPC+VTG+CGS+ V LIPAPRGTG
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTG 179
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/66 (45%), Positives = 35/66 (53%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPK LL MAG+ D +SA G T TLGNF YL PDL ++ KS
Sbjct: 182 SAPVPK-LLMMAGIDDS-SSASGCTATLGNFTKAIFDTISKTHSYLIPDLQKETVFAKSL 239
Query: 73 YSEFKV 56
Y +V
Sbjct: 240 YQNSRV 245
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 89.4 bits (212), Expect = 5e-17
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = -1
Query: 495 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKV 316
K V +GD +GH+GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K
Sbjct: 131 KVAVLVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKT 190
Query: 315 TGKCGSVTVRLIPAPRGTGIGLRQF 241
+GK GSV V + PAP+GTGI +F
Sbjct: 191 SGKAGSVVVCIKPAPKGTGIVASKF 215
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 88.6 bits (210), Expect = 9e-17
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWGNKIGKPH 334
R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W G PH
Sbjct: 76 RARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPH 135
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
++P G CGSV V L+PAPRG G+
Sbjct: 136 SIPFTAKGACGSVKVELLPAPRGVGL 161
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 87.8 bits (208), Expect = 1e-16
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPH 334
R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W + +PH
Sbjct: 80 RVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPH 139
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
+VP V GK GSV VRLIP PRG G+
Sbjct: 140 SVPFAVEGKEGSVRVRLIPGPRGLGL 165
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 85.4 bits (202), Expect = 8e-16
Identities = 40/64 (62%), Positives = 43/64 (67%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSP
Sbjct: 148 SAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSP 207
Query: 73 YSEF 62
Y EF
Sbjct: 208 YQEF 211
Score = 46.4 bits (105), Expect = 5e-04
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1
Query: 321 KVTGKCGSVTVRLIPAPRGTGI 256
KVTG+CGSV VRLIPAPRGTGI
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGI 146
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 85.4 bits (202), Expect = 8e-16
Identities = 40/64 (62%), Positives = 43/64 (67%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSP
Sbjct: 10 SAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSP 69
Query: 73 YSEF 62
Y EF
Sbjct: 70 YQEF 73
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/84 (57%), Positives = 54/84 (64%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
+TRFKAFV D NGH+ L EVATAIRGAIIL + S+ G+ GNKI KPHTV
Sbjct: 27 QTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAWGGWSGNKIAKPHTV 80
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
C+VT SV V I APRGT I
Sbjct: 81 SCRVTRLYCSVLVHHISAPRGTDI 104
Score = 39.5 bits (88), Expect = 0.052
Identities = 23/52 (44%), Positives = 26/52 (50%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 98
SAPVPKKLL+MA + D + ARG T L N LT D WR
Sbjct: 106 SAPVPKKLLRMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFWR 156
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/97 (40%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHT 331
+R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G+PH+
Sbjct: 74 SRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHS 133
Query: 330 VPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRW 220
+P KV GK GSV V L+PAP+GTG+ + L++ +
Sbjct: 134 LPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTY 170
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 82.6 bits (195), Expect = 6e-15
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 325
TR + GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 104 TRVGQYYKAGDYNGHVITGLD---EVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 324 CKVTGKCGSVTVRLIPAPRGTGI 256
CKVTG GSV++ LIPAPR T I
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVI 182
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARG 185
SAP+PKKLL MAG+ DC+TSARG
Sbjct: 184 SAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHT 331
TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W + + H+
Sbjct: 107 TRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQKHS 166
Query: 330 VPCKVTGKCGSVTVRLIPAPRGTGI 256
VP KV GK GSVT+ +IPAPRG G+
Sbjct: 167 VPFKVKGKGGSVTIEIIPAPRGLGL 191
Score = 33.1 bits (72), Expect = 4.5
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = -3
Query: 238 KKLLQMAGVQDCYTSARGSTGTLGN 164
K+LL++AG++D +T+A+GST T+ +
Sbjct: 198 KRLLELAGLKDAWTTAKGSTPTMNS 222
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPH 334
R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W GKPH
Sbjct: 65 RMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPH 124
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFR 223
T+P V GK GSV+V L PAP+G G+ + ++ R
Sbjct: 125 TLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 78.6 bits (185), Expect = 9e-14
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPH 334
+TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG W G PH
Sbjct: 80 KTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWECACGAPH 139
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFR 223
++P +V GK GSV V L PAP+G GI ++ FR
Sbjct: 140 SIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPH 334
R RF +G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G
Sbjct: 52 RVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGT 111
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLR 235
+VP K+TG+ GS V L+PAP G G+ + + R
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGR 144
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 76.2 bits (179), Expect = 5e-13
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL MA + DCYT ARG T TLGNF YLTPDLW++ TKSP
Sbjct: 148 SAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFDAISKIYSYLTPDLWKETVFTKSP 206
Query: 73 YSEF 62
Y EF
Sbjct: 207 YQEF 210
Score = 41.5 bits (93), Expect = 0.013
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 321 KVTGKCGSVTVRLIPAPRGTGI 256
KVTG+CGSV VRL APRGTGI
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGI 146
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/93 (45%), Positives = 51/93 (54%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
+ R K F GD NGH+GLG+KCSKEVATA +G + +L ++ + V
Sbjct: 9 KNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ETRLSRSTLV 59
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSF 229
KVT GSV V LIPAPRGTGI L F
Sbjct: 60 QYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKF 92
Score = 36.7 bits (81), Expect = 0.37
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 161
SAPV K L AG+ +CY SAR T TL NF
Sbjct: 85 SAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHT 331
TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W + + H+
Sbjct: 88 TRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQKHS 147
Query: 330 VPCKVTGKCGSVTVRLIPAPRGTGI 256
VP KV GK GSV + ++PAPRG G+
Sbjct: 148 VPFKVRGKGGSVVIEILPAPRGLGL 172
Score = 32.7 bits (71), Expect = 6.0
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = -3
Query: 238 KKLLQMAGVQDCYTSARGSTGT 173
++LL++AG++D YT+A+GST T
Sbjct: 179 RRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 72.9 bits (171), Expect = 5e-12
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPH 334
R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+PH
Sbjct: 67 RVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPH 126
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
TV + GK GSV V L PAPRG G+
Sbjct: 127 TVALRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
SAPVPKKLL +A + DCYTSARG T TL NF YLTP+LW+ + KS
Sbjct: 187 SAPVPKKLLLLANIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPNLWKGLVFAKST 246
Query: 73 YSEF 62
Y EF
Sbjct: 247 YLEF 250
Score = 50.8 bits (116), Expect = 2e-05
Identities = 37/87 (42%), Positives = 47/87 (54%)
Frame = -1
Query: 528 ETNTCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 349
+T T FK FV+I D + H+ L KCSK+ ATAI VL V +G +
Sbjct: 109 QTQTWLPSRPFKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETR 157
Query: 348 IGKPHTVPCKVTGKCGSVTVRLIPAPR 268
+G TV CKVTG+C SV + LIP R
Sbjct: 158 LGS-LTVSCKVTGQCVSVLICLIPPTR 183
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPH 334
R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G +
Sbjct: 118 RVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTN 177
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRS 232
++ K GK GSVTV + PAP+G G+ + +R+
Sbjct: 178 SLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRN 211
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +1
Query: 256 NSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFL 435
++ T+ NQ + TTL L GV L+ + TPVTSS+W N QL D++ S+G+ +FL
Sbjct: 79 DTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFL 138
Query: 436 AALHTQTNMTVVVANGNKCLET 501
+ L+TQT++TV V N + LE+
Sbjct: 139 SGLNTQTDVTVGVTNDDDSLES 160
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 65.3 bits (152), Expect = 9e-10
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
RTR K F + + L V CSKEV TA + AI L + + GY GNKIG PHT+
Sbjct: 75 RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHTI 132
Query: 327 PCKVTG-KCGSVTVRLIPAPRGTG 259
PC VT + V V L APRGTG
Sbjct: 133 PCDVTATEKNLVLVCLTTAPRGTG 156
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 59.3 bits (137), Expect = 6e-08
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 316 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 495
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 496 E 498
E
Sbjct: 78 E 78
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -1
Query: 357 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
GNKIGK H V CKVTG CGSV V LIPA RGTGI
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGI 40
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 161
SAPVP K L MAG+ DCYTSARG T +L F
Sbjct: 42 SAPVPTKPLMMAGIDDCYTSARGCTASLDYF 72
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 56.0 bits (129), Expect = 6e-07
Identities = 36/100 (36%), Positives = 46/100 (46%)
Frame = -3
Query: 556 DEVLKIMPDRNKHVPDAHTFQGICCHWRQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFT 377
DEVLKIMP R + T R Y EV QG H R ++P +
Sbjct: 32 DEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCH 91
Query: 376 SSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWN 257
++RLLG QDR+A HRPLQG R + C +W+
Sbjct: 92 RAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWH 131
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R RF A V +GD NGH+G G ++EV AI+ A+ AK +++ V +G T+
Sbjct: 31 RFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLISV------PIVGT--TI 82
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P ++ G+ GS V + PA GTG+
Sbjct: 83 PHEIHGQFGSGNVLMKPAAEGTGV 106
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 53.2 bits (122), Expect = 4e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F+A VA+GD NG IGLG +KEV A+ A + AK + + V I K +++P +
Sbjct: 93 FRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEAKKTAITV-------PITKDYSLPHR 145
Query: 318 VTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRWLVYRTA 202
+ + G+ +V + PA GTG+ +R+ Y+ A
Sbjct: 146 LDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNA 184
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 53.2 bits (122), Expect = 4e-06
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = -1
Query: 501 RFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 322
RF A V IGD NG +G G+ S EV AI+ AI A +++ V++ K ++
Sbjct: 70 RFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQ-------TKKGSIYH 122
Query: 321 KVTGKCGSVTVRLIPAPRGTGI 256
V G+ G+ V L+PAP GTGI
Sbjct: 123 DVNGRHGAAKVMLLPAPEGTGI 144
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 53.2 bits (122), Expect = 4e-06
Identities = 34/93 (36%), Positives = 50/93 (53%)
Frame = -1
Query: 534 LTETNTCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 355
+++T RF A IGD G++G G+ S EV AIR A+ AK ++ V
Sbjct: 88 ISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNNMYKV------ 141
Query: 354 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
K+ K T+ +V GK G+ V + PAP+GTG+
Sbjct: 142 -KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGV 173
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 51.6 bits (118), Expect = 1e-05
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHTV 328
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 53 TRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-TY 108
Query: 327 PCKVTG 310
PCK TG
Sbjct: 109 PCKRTG 114
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = -3
Query: 253 SAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 74
S VP+KL+ A + CYTSAR T TLGN TP+LW++ TKSP
Sbjct: 130 SVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLWKEAVFTKSP 188
Query: 73 Y 71
Y
Sbjct: 189 Y 189
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F A+GD G IGLG+ + V AIR AI AK +++ + K +T+P +
Sbjct: 31 FSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHE 82
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
+ GK G+ T+ + PA GTG+
Sbjct: 83 IAGKWGATTLWMAPAYEGTGV 103
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPH 334
R RF A V +GD NG +G+G+ +KEV AI A +A+ +++ PV G
Sbjct: 36 RFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMITVPVENG---------- 85
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
T+P ++ G+ + V L PA GTG+
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGV 111
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 49.2 bits (112), Expect = 6e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F+ IG+ NG +G+G + +EVATA++ A++ AK SV+ V + T+P +
Sbjct: 535 FRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDAKKSVVRV-------PLVGAGTIPHR 587
Query: 318 VTGKCGSVTVRLIPAPRGTGIGLRQFLRS 232
V K + ++PA GTG+ +RS
Sbjct: 588 VEAKFNAARCVMVPAADGTGVLAGSSIRS 616
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPH 334
R F V +GD GH+G G +KEV AI I AK +V+ P+ G
Sbjct: 47 RFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG---------- 96
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
TVP V G G+ + ++PA RGTG+
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGV 122
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = -1
Query: 543 RSCLTETNTCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 364
R T+ T + F+ + IG+ NG IG G K+ TA+R A + A+ +++P+
Sbjct: 172 RDTNTQVTTLQRINSFRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLD 231
Query: 363 YWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRG 265
W HT P +TG+ + + P P G
Sbjct: 232 LW-------HTCPIPLTGRFNDAEIEINPRPLG 257
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R F A +GD G +G+G + EV AIR +I AK ++ + K HT+
Sbjct: 49 RFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHLVKIN--------FKGHTI 100
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P +V GK S V L P+ GTGI
Sbjct: 101 PHEVIGKFKSARVILKPSTAGTGI 124
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -1
Query: 501 RFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 322
+F+A V +GD G++G+G +KEV A++ + I A+ +++ V + K T P
Sbjct: 168 KFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQV-------PMTKYSTFPH 220
Query: 321 KVTGKCGSVTVRLIPAPRGTGI 256
+ G G+ V L PA GTG+
Sbjct: 221 RSEGDYGAAKVMLRPASPGTGV 242
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/81 (29%), Positives = 46/81 (56%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F+A + +GD NG +G+GV + +V A++ + A+ +++ V + K +++P
Sbjct: 88 FRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALIRV-------PLNKINSIPHP 140
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
++G G+ V L PA GTG+
Sbjct: 141 MSGSSGAANVFLKPASGGTGV 161
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F+A V +GD G +G+GV +KEV A++ + A+ +++ V + K T P +
Sbjct: 206 FRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNIITV-------PMTKYLTFPHR 258
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
G G+ V L PA GTG+
Sbjct: 259 ADGDYGAAKVMLRPASPGTGV 279
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 46.0 bits (104), Expect = 6e-04
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV--LPVRRGYWGNKIGKPHTVP 325
F+ +G+ NG +GLG+ ++EV AIR AI AK ++ +PV G T+P
Sbjct: 37 FRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIVEVPVING----------TIP 86
Query: 324 CKVTGKCGSVTVRLIPAPRGTGI 256
+V G+ + V L PA GTGI
Sbjct: 87 HEVIGRQDASKVLLKPAAPGTGI 109
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 45.6 bits (103), Expect = 8e-04
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = -1
Query: 501 RFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 322
RF A V +GD G +GLG + EV AI+ A+ AK +++ V + TVP
Sbjct: 64 RFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRVPL--------RGTTVPH 115
Query: 321 KVTGKCGSVTVRLIPAPRGTGI 256
+V G G+ V + PA GTG+
Sbjct: 116 EVIGHFGAGQVLIKPAKPGTGV 137
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R RF A V +GD G IG +KE+ AI+ A+ AK + VR G T+
Sbjct: 34 RFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQL--VRIPITGT------TI 85
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P G+ G+ L PA +GTGI
Sbjct: 86 PHDTIGRFGASKFFLKPASKGTGI 109
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -1
Query: 528 ETNTCR-TRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 412
+ TC +TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 116 QKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 35.9 bits (79), Expect = 0.64
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 379 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYW 260
+S KR+LG QDR TH P+Q R+ S S YW
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYW 208
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -3
Query: 244 VPKKLLQMAGVQDCYTSARGSTGTLGNF 161
VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 10 VPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 43.2 bits (97), Expect = 0.004
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -1
Query: 534 LTETNTCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLSVLPVRRGY 361
+++T RF V +G+ G IG G+ + EV AI+ AI A L + + +G
Sbjct: 76 ISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLHTIEIHKG- 134
Query: 360 WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
++ +V G+ G+ V L PAP+GTGI
Sbjct: 135 ---------SIYHEVIGRSGASRVLLKPAPQGTGI 160
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 40.7 bits (91), Expect = 0.022
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGL 451
RTRFKAFVAIGD NGH+GL
Sbjct: 96 RTRFKAFVAIGDYNGHVGL 114
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 40.7 bits (91), Expect = 0.022
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = -1
Query: 540 SCLTETNTCRTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY 361
S +T+ + F+A V IGD NG +G+GV +++V A + A + +++ V
Sbjct: 34 SRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLIDV---- 89
Query: 360 WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
I K ++P V G G+ + + P+ G+G+
Sbjct: 90 ---PITKSLSIPHAVIGDLGACKIIMRPSIEGSGV 121
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 40.3 bits (90), Expect = 0.030
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +2
Query: 257 IPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGKTDN 391
+PVP GAG+ T TEP P+TL G +CG LLP P+ + DN
Sbjct: 44 MPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP--PVASTHRDN 85
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 39.9 bits (89), Expect = 0.039
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPH 334
R F A V +GD G +G G ++EV AI A AK +++ P+R G + G+
Sbjct: 78 RFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKTMIRVPLREGRTLHHDGR-- 135
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRWL 217
G+ G+ V L AP GTGI +R+ F L
Sbjct: 136 -------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESL 167
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.052
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPH 334
R F A V +G+ +G +G G + EV +++ A A S++ P+ G
Sbjct: 40 RFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQASRSMIHVPLVEG---------- 89
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRS 232
++P +V G+ G+ V LIPA GTGI Q +R+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRA 123
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.5 bits (88), Expect = 0.052
Identities = 31/84 (36%), Positives = 40/84 (47%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R F A V +GD NG +G+G +KEV AI + A+ S V IG T
Sbjct: 61 RFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFFRV------PLIGGTITH 114
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P V G+ + V L PA GTG+
Sbjct: 115 P--VQGEAAAGVVLLRPASPGTGV 136
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 39.5 bits (88), Expect = 0.052
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R F A V +GD NG +G G+ + +V AIR + A+ + V + PH
Sbjct: 35 RFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKDMALVSL----TDVSIPH-- 88
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
+V G G+ V L PA GTG+
Sbjct: 89 --QVIGHYGAGRVFLRPASAGTGL 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 38.7 bits (86), Expect = 0.091
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LSVLPVRRGYWGNKIGKPH 334
R F A V +GD G +G G ++EV AIR A AK L +P+R G
Sbjct: 41 RFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLIFVPLRGG---------R 91
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRWL 217
T+ V G+ G+ V L A GTGI +R+ F L
Sbjct: 92 TLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETL 130
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 38.7 bits (86), Expect = 0.091
Identities = 29/81 (35%), Positives = 38/81 (46%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F A V +GD NG +G+G S+EV AI + AK + V R T+
Sbjct: 67 FAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFSVPR--------VRGTITHP 118
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
V G + TV L PA GTG+
Sbjct: 119 VQGHDAAGTVLLRPAAPGTGV 139
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 38.3 bits (85), Expect = 0.12
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -1
Query: 507 RTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 331
+ R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR + N+ T
Sbjct: 358 KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--YENR-----T 410
Query: 330 VPCKVTGKCGSVTVRLIPAPRGTGI 256
+ VT K V L+ P G G+
Sbjct: 411 IYGNVTSKISGTVVELMARPPGFGL 435
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 38.3 bits (85), Expect = 0.12
Identities = 31/113 (27%), Positives = 52/113 (46%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F A +GD G +G+G S+EV A++ A+ A+ ++ V N I T+
Sbjct: 43 FAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQRMVRV------NLIN--GTLHHS 94
Query: 318 VTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRWLVYRTATPQLVVQLAPWEIL 160
V G+ G+ V + PA GTGI +R+ F + + + P+ I+
Sbjct: 95 VIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPYNIV 147
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 37.5 bits (83), Expect = 0.21
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F A V +GD G +G G + EV+ AIR A+ +++ V T+P +
Sbjct: 37 FGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNLVTVPM--------HGQTLPHE 88
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
V K G V L PA GTG+
Sbjct: 89 VEVKFGGARVLLRPASAGTGL 109
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.21
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R F A V +GD G +G G + EV AI+ A+ A+ +++ V I TV
Sbjct: 108 RFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV-------PIINKSTV 160
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P + K + V L PAP+G GI
Sbjct: 161 PHEQWAKFLASKVMLKPAPKGKGI 184
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.28
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 403 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 501
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.1 bits (82), Expect = 0.28
Identities = 27/84 (32%), Positives = 38/84 (45%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 328
R F A +GD NG +G+G + EV AI+ A+ ++ V K T+
Sbjct: 90 RFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKRMVSVTL--------KGDTI 141
Query: 327 PCKVTGKCGSVTVRLIPAPRGTGI 256
P +V G V L PA GTG+
Sbjct: 142 PHEVFGTHDGGKVLLRPAVTGTGL 165
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 37.1 bits (82), Expect = 0.28
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = -1
Query: 504 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 325
T F A V +G+ +G IG +V AI A A S+ V+R + HT+
Sbjct: 20 TNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYVQRF-------EDHTIY 72
Query: 324 CKVTGK-CGSVTVRLIPAPRGTGI 256
+V GK C ++ V ++PAP G GI
Sbjct: 73 HEVRGKYCKTICV-MLPAPSGDGI 95
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 37.1 bits (82), Expect = 0.28
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -1
Query: 513 RTRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGK 340
RT T F A V +G+ +G IG G+ + EV AI + AK +++ PV G
Sbjct: 34 RTFT-FAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKNLIRVPVHNG-------- 84
Query: 339 PHTVPCKVTGKCGSVTVRLIPAPRGTGI 256
T+P + G +V L PA GTG+
Sbjct: 85 --TIPHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 36.7 bits (81), Expect = 0.37
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -3
Query: 244 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 80
V KK L +A +QDCY AR + LGN+ YLT DLW + TK
Sbjct: 14 VLKKKLLLASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTENVCTK 68
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 36.7 bits (81), Expect = 0.37
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LSVLPVRRGYWGNKIGKPH 334
R F A V +G+ G IG+ +K+V AI+ A A+ L +P+R G
Sbjct: 30 RFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLIHVPLREG---------R 80
Query: 333 TVPCKVTGKCGSVTVRLIPAPRGTGI 256
T+ V GK G+ + L AP+GTGI
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGI 106
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.9 bits (79), Expect = 0.64
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F+A V +G+ G +G+GV + +V A+R + K ++ V + K +++
Sbjct: 39 FRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLIEV-------PLTKSNSITHI 91
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
G G V + PA GTG+
Sbjct: 92 TNGVSGGAKVVVRPAAPGTGV 112
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 118 LTPDLWRDIPLTKSPYSEF 62
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 2.6
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -1
Query: 465 GHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK--PHTVPCKVTGKCGSV 295
GH GL CS EVATAI+ I + L S P+ R GN GK P P ++ S+
Sbjct: 98 GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSVCPMQIRDYHSSM 155
Query: 294 TVRLIPAP 271
LI AP
Sbjct: 156 LACLITAP 163
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 33.5 bits (73), Expect = 3.4
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 477 GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGS 298
G+ NG +G+G+ S E+ A + A A ++ PV R Y + T+ V GK G+
Sbjct: 284 GNQNGLMGIGIAKSDEIIDACQQARARAVKNMQPVPR-Y------EKRTIFGDVEGKVGA 336
Query: 297 VTVRLIPAPRGTGI 256
V ++L+ P G G+
Sbjct: 337 VQLKLMHRPPGFGL 350
>UniRef50_UPI0000E8028C Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 91
Score = 33.1 bits (72), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 292 SPADSCPSWYWNWSAPVPKKLLQMAGVQ 209
SP SCP W W+ PVP+ L+ + VQ
Sbjct: 28 SPPCSCPWWLWHRVLPVPRALIPVCQVQ 55
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 4.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 495 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 343
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7S8R4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 304
Score = 33.1 bits (72), Expect = 4.5
Identities = 26/75 (34%), Positives = 34/75 (45%)
Frame = -1
Query: 324 CKVTGKCGSVTVRLIPAPRGTGIGLRQFLRSFFRWLVYRTATPQLVVQLAPWEILLKPHM 145
CK GKC + VR RGTG + Q + LV + P + V + L P +
Sbjct: 215 CKNGGKCVDMLVRAECDCRGTGY-VGQHCQLKKEILVNDSKEPNVTVGVTAHVRGLAPGL 273
Query: 144 LPLPRHMPTSLLTCG 100
PLP + LLTCG
Sbjct: 274 QPLPLTVIMVLLTCG 288
>UniRef50_Q5RGG6 Cluster: Novel protein similar to vertebrate
delta-like 4; n=1; Danio rerio|Rep: Novel protein
similar to vertebrate delta-like 4 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 645
Score = 32.7 bits (71), Expect = 6.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 418 GSGDFLAALHTQTNMTVVVANGNKCLETCARPARVC 525
GSG F LH N ++ANGN C C RVC
Sbjct: 3 GSGVFELDLHEFKNFKGLLANGNSCTPDCRTFFRVC 38
>UniRef50_A5K2K1 Cluster: RNA-binding protein, putative; n=8;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium vivax
Length = 513
Score = 32.7 bits (71), Expect = 6.0
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 391 LSKDNSASNGSG-DFLA-ALHTQTNMTVVVANGNKCLETCARPARVCFCQ 534
+ KDNS G G F+ A Q + NG K LE CARP V F +
Sbjct: 218 IMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 32.7 bits (71), Expect = 6.0
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -1
Query: 480 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCG 301
+G+ NG IGLG S + A+ A ++A +++P+RR Y + T+ KV K
Sbjct: 278 VGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRR-Y------EDRTIYGKVKVKIA 330
Query: 300 SVTVRLIPAPRGTGI 256
V + P G G+
Sbjct: 331 GTVVEMAARPPGFGL 345
>UniRef50_Q15VP0 Cluster: Putative uncharacterized protein
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Putative uncharacterized protein precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 343
Score = 32.3 bits (70), Expect = 7.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 226 EEAS*ELAQTNSSTTRGRNQPDCYRTTLAGDLARDGV 336
++A E T S T G Q CYR TLAG+ A D +
Sbjct: 68 DDAVIESITTQSCTLSGGTQTTCYRITLAGEPANDEI 104
>UniRef50_A4VQ17 Cluster: Putative DNA helicase; n=1; Pseudomonas
stutzeri A1501|Rep: Putative DNA helicase - Pseudomonas
stutzeri (strain A1501)
Length = 695
Score = 32.3 bits (70), Expect = 7.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 209 LYTSHLKKLLRNWRRPIPVPRGAGISRTVTEPHLPVTLQGTVCGFP 346
L+ S K + RNW P+ V GAG +TV H L P
Sbjct: 242 LHPSQRKLVERNWNGPVKVTGGAGTGKTVVAMHRAARLARQYSALP 287
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 32.3 bits (70), Expect = 7.9
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = -1
Query: 498 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 319
F A + +GD G +G G + E+ AIR A+ +++ + G+ I PH V
Sbjct: 35 FSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKNLITI-ESLEGDSI--PHEVLVD 91
Query: 318 VTGKCGSVTVRLIPAPRGTGI 256
G + L PA GTGI
Sbjct: 92 QDG----AQLLLKPAKPGTGI 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,966,265
Number of Sequences: 1657284
Number of extensions: 13505107
Number of successful extensions: 36349
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 34767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36296
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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